Click here to switch to the map view.

The map label for this gene is dgoA [H]

Identifier: 161525935

GI number: 161525935

Start: 3018693

End: 3019370

Strand: Reverse

Name: dgoA [H]

Synonym: Bmul_2766

Alternate gene names: 161525935

Gene position: 3019370-3018693 (Counterclockwise)

Preceding gene: 161525936

Following gene: 161525934

Centisome position: 87.56

GC content: 74.63

Gene sequence:

>678_bases
ATGTCGTCCGACCTGACGCTGCCCGCGCCGTACACGCCGCATGCCGGCCTGATGCGCGCGTTCGACGCGTGCCCGCTGAT
CGCGATCCTGCGCGGCATCACGCCGGCCGAAGCGGCCGAGCACGGCCGCGCGCTGTACGACGCCGGCTTCCGGCTCGTCG
AGGTGCCGCTCAATTCGCCGGCGCCGTTCGACAGCATCGCCGCGCTGCGCCGCGCGCTGCCGGACGACGCGATCGTCGGC
GCGGGCACCGTGCTGCGCGCCGAATACGTGGACCGCGTGCAGGACGCAGGCGGTGCGCTGATCGTGATGCCGCATGCGGA
TACCGCGGTGATACGCCGTGCGCGCGAGCGCGGCCTTGCCTGCGCGCCGGGCGTCGCGACGCCGACCGAAGCGTTCGCGG
CGCTCGCCAACGGCGCCGACGTGCTGAAGATGTTTCCCGCCGAGCAGCTCGGCACGGCCGTCGTGAAGGCATGGCGCGCG
GTGATCGATCGCGCGGTGCCGCTGGTGCCGGTCGGCGGGATCGCACCCGACAACATGCAGCCGTTCCTCGCGGCCGGCGC
GAACGGATTCGGGCTCGGCTCCGCGCTCTACCGGCCGGGCCAGTCGGTCGACACGACGGCCGCCCATGCGCGCGCGTTCC
AGGCCGGCCTGCGCGCGGCGCGCGGCGGAGCCGCATGA

Upstream 100 bases:

>100_bases
GGGCTGTGGCAGATCGCGTCGCGCGCGGGGCTCGTGCACACGGACGGCGAACCCGTATGCGCCGGCCACTGAACCGAACC
GATTGCGGAGGAATGTAACG

Downstream 100 bases:

>100_bases
TGAACCGGCTGGCGGGCAAGGTCGCGATGGTTACCGGCGCGGCGCGCGGCATCGGCGCGGCGATCGCGCGCGCATTTGCC
GGCGAGGGCGCGCGCGTCGC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSSDLTLPAPYTPHAGLMRAFDACPLIAILRGITPAEAAEHGRALYDAGFRLVEVPLNSPAPFDSIAALRRALPDDAIVG
AGTVLRAEYVDRVQDAGGALIVMPHADTAVIRRARERGLACAPGVATPTEAFAALANGADVLKMFPAEQLGTAVVKAWRA
VIDRAVPLVPVGGIAPDNMQPFLAAGANGFGLGSALYRPGQSVDTTAAHARAFQAGLRAARGGAA

Sequences:

>Translated_225_residues
MSSDLTLPAPYTPHAGLMRAFDACPLIAILRGITPAEAAEHGRALYDAGFRLVEVPLNSPAPFDSIAALRRALPDDAIVG
AGTVLRAEYVDRVQDAGGALIVMPHADTAVIRRARERGLACAPGVATPTEAFAALANGADVLKMFPAEQLGTAVVKAWRA
VIDRAVPLVPVGGIAPDNMQPFLAAGANGFGLGSALYRPGQSVDTTAAHARAFQAGLRAARGGAA
>Mature_224_residues
SSDLTLPAPYTPHAGLMRAFDACPLIAILRGITPAEAAEHGRALYDAGFRLVEVPLNSPAPFDSIAALRRALPDDAIVGA
GTVLRAEYVDRVQDAGGALIVMPHADTAVIRRARERGLACAPGVATPTEAFAALANGADVLKMFPAEQLGTAVVKAWRAV
IDRAVPLVPVGGIAPDNMQPFLAAGANGFGLGSALYRPGQSVDTTAAHARAFQAGLRAARGGAA

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=203, Percent_Identity=49.2610837438424, Blast_Score=173, Evalue=7e-45,
Organism=Escherichia coli, GI1788156, Length=144, Percent_Identity=34.7222222222222, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23110; Mature: 22979

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDLTLPAPYTPHAGLMRAFDACPLIAILRGITPAEAAEHGRALYDAGFRLVEVPLNSP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCEEEEECCCCC
APFDSIAALRRALPDDAIVGAGTVLRAEYVDRVQDAGGALIVMPHADTAVIRRARERGLA
CCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCE
CAPGVATPTEAFAALANGADVLKMFPAEQLGTAVVKAWRAVIDRAVPLVPVGGIAPDNMQ
ECCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PFLAAGANGFGLGSALYRPGQSVDTTAAHARAFQAGLRAARGGAA
HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSDLTLPAPYTPHAGLMRAFDACPLIAILRGITPAEAAEHGRALYDAGFRLVEVPLNSP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCEEEEECCCCC
APFDSIAALRRALPDDAIVGAGTVLRAEYVDRVQDAGGALIVMPHADTAVIRRARERGLA
CCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCE
CAPGVATPTEAFAALANGADVLKMFPAEQLGTAVVKAWRAVIDRAVPLVPVGGIAPDNMQ
ECCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PFLAAGANGFGLGSALYRPGQSVDTTAAHARAFQAGLRAARGGAA
HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]