Definition Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence.
Accession NC_010084
Length 3,448,466

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The map label for this gene is ymbA [C]

Identifier: 161525844

GI number: 161525844

Start: 2921038

End: 2921769

Strand: Direct

Name: ymbA [C]

Synonym: Bmul_2675

Alternate gene names: 161525844

Gene position: 2921038-2921769 (Clockwise)

Preceding gene: 161525843

Following gene: 161525845

Centisome position: 84.71

GC content: 76.5

Gene sequence:

>732_bases
ATGACGACGACTCGCGTGAACGTTCTCGCGAGCGGCGCGGCAGCCGTGCTCGCCGCACTCGCGCTTGCCGCGTGCAGTTC
GCCGCCCGCGCGGTTCTATACGCTCGCCCGCGCCGACGCCGCCGCGCCCGCGCGCACCGCGCCAGCCAATCCGCCGTTCC
TGATCGAGGTGCCGTCGGTCGACGTGCCCGAGCAGATCGCAAAGAATCAGCTCGTCGTGCAGAAGGGCGGCGCGCAGGTC
GACGTGCTCGAACAGGAGCGCTGGGCGGCGCCGCCCGCCGACGAAATCCGCCGGGCGCTGTCCGACGATCTCGCCGCGCG
GCTCGGCACGATCGACGTCGCCGACTCCGCCGTGCCGCCGGGCATGCCCGTGTACCGGATCAGCGTGAACGTGCAGCGCT
TCGAATCGTGGCCCGGCAAGCGCGCGGCGATCGACGCCGTGTGGAGCGTGCGCGCGGTCGGCTCGCAAGCGGTCATGACG
TGCCGCACGAGCGTCGCCGAGCCGGTCGGCAGCGGCTACGACGCGCTGGTCGCCGGCCATCGGCGCGCGCTCGACGCGAT
CGCGGCGCAGGCGGCGGCCGGCGTGCGCGCGCTCGCCGCGCGCCGCGGCACGGCCGCGCAGCCGGCCGGCAAGACGGCCG
CCGCAGCGGTCCCGCCGCTCGTGCCCTGCCCGCCGGCGCCGGCTGCGGTGCCCGCGACCGACGCCGGCGCGACCGGCCAG
CCGGGCGCATAA

Upstream 100 bases:

>100_bases
TGAAGGAACTCACGCGCACGCTGCAGTCGCTCAACGCGCTCGCCGACTATCTGGAGCGCCATCCCGAATCGCTGATCAAG
GGCAAGCCAGGAGATCAACC

Downstream 100 bases:

>100_bases
AAGCGCGCGGCTCGCCGCCGCGCGACTTTGCACTCTTTGTCAAAGTCGGCCGGAACCGGCGCCGCGTCGCGCGGTCGCCT
TGCGTTTTTGCGGTCGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTTTRVNVLASGAAAVLAALALAACSSPPARFYTLARADAAAPARTAPANPPFLIEVPSVDVPEQIAKNQLVVQKGGAQV
DVLEQERWAAPPADEIRRALSDDLAARLGTIDVADSAVPPGMPVYRISVNVQRFESWPGKRAAIDAVWSVRAVGSQAVMT
CRTSVAEPVGSGYDALVAGHRRALDAIAAQAAAGVRALAARRGTAAQPAGKTAAAAVPPLVPCPPAPAAVPATDAGATGQ
PGA

Sequences:

>Translated_243_residues
MTTTRVNVLASGAAAVLAALALAACSSPPARFYTLARADAAAPARTAPANPPFLIEVPSVDVPEQIAKNQLVVQKGGAQV
DVLEQERWAAPPADEIRRALSDDLAARLGTIDVADSAVPPGMPVYRISVNVQRFESWPGKRAAIDAVWSVRAVGSQAVMT
CRTSVAEPVGSGYDALVAGHRRALDAIAAQAAAGVRALAARRGTAAQPAGKTAAAAVPPLVPCPPAPAAVPATDAGATGQ
PGA
>Mature_242_residues
TTTRVNVLASGAAAVLAALALAACSSPPARFYTLARADAAAPARTAPANPPFLIEVPSVDVPEQIAKNQLVVQKGGAQVD
VLEQERWAAPPADEIRRALSDDLAARLGTIDVADSAVPPGMPVYRISVNVQRFESWPGKRAAIDAVWSVRAVGSQAVMTC
RTSVAEPVGSGYDALVAGHRRALDAIAAQAAAGVRALAARRGTAAQPAGKTAAAAVPPLVPCPPAPAAVPATDAGATGQP
GA

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24528; Mature: 24397

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRVNVLASGAAAVLAALALAACSSPPARFYTLARADAAAPARTAPANPPFLIEVPSV
CCCCEEHHHHCCHHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCCCCCCEEEECCCC
DVPEQIAKNQLVVQKGGAQVDVLEQERWAAPPADEIRRALSDDLAARLGTIDVADSAVPP
CCHHHHHCCEEEEECCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GMPVYRISVNVQRFESWPGKRAAIDAVWSVRAVGSQAVMTCRTSVAEPVGSGYDALVAGH
CCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHH
RRALDAIAAQAAAGVRALAARRGTAAQPAGKTAAAAVPPLVPCPPAPAAVPATDAGATGQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PGA
CCC
>Mature Secondary Structure 
TTTRVNVLASGAAAVLAALALAACSSPPARFYTLARADAAAPARTAPANPPFLIEVPSV
CCCEEHHHHCCHHHHHHHHHHHHHCCCCHHHEEEHHHCCCCCCCCCCCCCCEEEECCCC
DVPEQIAKNQLVVQKGGAQVDVLEQERWAAPPADEIRRALSDDLAARLGTIDVADSAVPP
CCHHHHHCCEEEEECCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GMPVYRISVNVQRFESWPGKRAAIDAVWSVRAVGSQAVMTCRTSVAEPVGSGYDALVAGH
CCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHH
RRALDAIAAQAAAGVRALAARRGTAAQPAGKTAAAAVPPLVPCPPAPAAVPATDAGATGQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PGA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA