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The map label for this gene is glcF [H]

Identifier: 161525823

GI number: 161525823

Start: 2896752

End: 2897978

Strand: Direct

Name: glcF [H]

Synonym: Bmul_2654

Alternate gene names: 161525823

Gene position: 2896752-2897978 (Clockwise)

Preceding gene: 161525822

Following gene: 161525824

Centisome position: 84.0

GC content: 68.22

Gene sequence:

>1227_bases
ATGCAAACGAACCTCGCCGACTTCATCCGCGACACGCCCGACGGCAACGAGGCCGACGCGATCCTGCGCAAGTGCGTGCA
CTGCGGGTTCTGCACCGCGACGTGCCCGACCTATCAGTTGCTCGGCGACGAACTCGACGGCCCGCGCGGACGCATTTACC
TGATCAAGCAGATGGTTGAAGGCGCGAAAGTCACGCGCAGCACGCAGCAGCATCTCGATCGCTGCCTCACGTGCCGCAGC
TGCGAGACGACGTGCCCGTCGGGCGTCCAGTACGGCCGGCTCGTCGAGATCGGCCGCAAGCACGTCGAGGCGCAGGTGCA
GCGCCCGCTGTCGCAGCGGCTCGTGCGCCGCCTGCTCGCGAGCCTCGTGCCGAACGCGACGCTGTTCTCGCCCGTGATGC
GGCTCGGCCAGCACGTGCGGCCGCTGCTGCCAAAGCGGCTGCGCGACAAGGTGCCGCCGCGCACGCGATTGCTCGAATGG
CCGCAGCGCACGCATCCGCGCAAGATGCTGATGCTCGGCGGCTGCGTGCAGCCGTCGATGCTGCCGAACATCAACATCGC
GACCGCGCGCGTGCTCGATGCGCTCGGCGTCGAGACGATCGTCGCGCCCGACGCGGGCTGCTGCGGCGCGATCCGGCTGC
ACCTCAACTATCACGACGAAGCGCTCGACGACGCGCGCCGCAATATCGACGCATGGTGGCCGTACGTCGAACAGGGCGTC
GAGGCGATCGTGATGAACGCGTCGGGCTGCGGCGCGACCGTGCTGGAATATGCGCACCTGCTGCGCGACGATCCGGCCTA
TGCGGAGAAGGCGCGGCGCATCGTCGCGTTGACGCGCGATATCTCCGACGTGCTGCTCGCGTTCGAGGCCGAACTCGCGA
CGCTCGGCCGCCGCCGCGCGATCCATACGGTCGCGTACCATCCGCCGTGCACGCTGCAGCACGGGCAGCAGTCGCGCGGC
AAGGTCGAACGCCTGCTCGAAACGCTCGGCATCGACGTGCGGCTGCCGGCCGACAGCCACCTCTGCTGCGGCTCGGCCGG
CACCTATTCGCTGACGCAGCCGTCGCTGTCGTACCGGTTGCGCAAGCAGAAGCTGCTGAAGCTGCAGGCGCTCGAACCGC
AGATGATCGTGTCCGGCAACGTCGGCTGCATCGCGCACCTGCAAAGCGGCACGCAGATTCCGGTCGCGCACTGGATCCAG
CTCGTCGAGCATCTCATCTACGGTTGA

Upstream 100 bases:

>100_bases
GCCGCGCCGCTGCTGAAAATCCACCGCGGGCTGAAGGCGGCGTTCGATCCCGCACGCATCTTCAACCGCGGCCGGCTGTA
TCCCGATCTCTGAGCTGCCG

Downstream 100 bases:

>100_bases
TGTCGGCGCTGGCCGCGCCGCTCGCCGCGCGCCGCTGGCCGCGCACCGCTGGCCGCGCGCCACGATCGCCGCGTGAAGGG
CGCGCATGCACGCGAGCGCG

Product: glycolate oxidase iron-sulfur subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEGAKVTRSTQQHLDRCLTCRS
CETTCPSGVQYGRLVEIGRKHVEAQVQRPLSQRLVRRLLASLVPNATLFSPVMRLGQHVRPLLPKRLRDKVPPRTRLLEW
PQRTHPRKMLMLGGCVQPSMLPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALDDARRNIDAWWPYVEQGV
EAIVMNASGCGATVLEYAHLLRDDPAYAEKARRIVALTRDISDVLLAFEAELATLGRRRAIHTVAYHPPCTLQHGQQSRG
KVERLLETLGIDVRLPADSHLCCGSAGTYSLTQPSLSYRLRKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQ
LVEHLIYG

Sequences:

>Translated_408_residues
MQTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEGAKVTRSTQQHLDRCLTCRS
CETTCPSGVQYGRLVEIGRKHVEAQVQRPLSQRLVRRLLASLVPNATLFSPVMRLGQHVRPLLPKRLRDKVPPRTRLLEW
PQRTHPRKMLMLGGCVQPSMLPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALDDARRNIDAWWPYVEQGV
EAIVMNASGCGATVLEYAHLLRDDPAYAEKARRIVALTRDISDVLLAFEAELATLGRRRAIHTVAYHPPCTLQHGQQSRG
KVERLLETLGIDVRLPADSHLCCGSAGTYSLTQPSLSYRLRKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQ
LVEHLIYG
>Mature_408_residues
MQTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEGAKVTRSTQQHLDRCLTCRS
CETTCPSGVQYGRLVEIGRKHVEAQVQRPLSQRLVRRLLASLVPNATLFSPVMRLGQHVRPLLPKRLRDKVPPRTRLLEW
PQRTHPRKMLMLGGCVQPSMLPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALDDARRNIDAWWPYVEQGV
EAIVMNASGCGATVLEYAHLLRDDPAYAEKARRIVALTRDISDVLLAFEAELATLGRRRAIHTVAYHPPCTLQHGQQSRG
KVERLLETLGIDVRLPADSHLCCGSAGTYSLTQPSLSYRLRKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQ
LVEHLIYG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=408, Percent_Identity=52.6960784313725, Blast_Score=435, Evalue=1e-123,
Organism=Escherichia coli, GI1788576, Length=410, Percent_Identity=21.9512195121951, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786497, Length=235, Percent_Identity=22.5531914893617, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 45408; Mature: 45408

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVE
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH
GAKVTRSTQQHLDRCLTCRSCETTCPSGVQYGRLVEIGRKHVEAQVQRPLSQRLVRRLLA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SLVPNATLFSPVMRLGQHVRPLLPKRLRDKVPPRTRLLEWPQRTHPRKMLMLGGCVQPSM
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCC
LPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALDDARRNIDAWWPYVEQGV
CCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHCCC
EAIVMNASGCGATVLEYAHLLRDDPAYAEKARRIVALTRDISDVLLAFEAELATLGRRRA
CEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHTVAYHPPCTLQHGQQSRGKVERLLETLGIDVRLPADSHLCCGSAGTYSLTQPSLSYRL
HEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCHHHHHH
RKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQLVEHLIYG
HHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTNLADFIRDTPDGNEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVE
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH
GAKVTRSTQQHLDRCLTCRSCETTCPSGVQYGRLVEIGRKHVEAQVQRPLSQRLVRRLLA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SLVPNATLFSPVMRLGQHVRPLLPKRLRDKVPPRTRLLEWPQRTHPRKMLMLGGCVQPSM
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCC
LPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALDDARRNIDAWWPYVEQGV
CCCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHCCC
EAIVMNASGCGATVLEYAHLLRDDPAYAEKARRIVALTRDISDVLLAFEAELATLGRRRA
CEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHTVAYHPPCTLQHGQQSRGKVERLLETLGIDVRLPADSHLCCGSAGTYSLTQPSLSYRL
HEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCEECCCCCCCCCCCCHHHHHH
RKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQLVEHLIYG
HHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]