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The map label for this gene is glcD [H]

Identifier: 161525821

GI number: 161525821

Start: 2893900

End: 2895393

Strand: Direct

Name: glcD [H]

Synonym: Bmul_2652

Alternate gene names: 161525821

Gene position: 2893900-2895393 (Clockwise)

Preceding gene: 161525820

Following gene: 161525822

Centisome position: 83.92

GC content: 67.67

Gene sequence:

>1494_bases
ATGAACGCCCCTGTCGAACTGTCCGCCCAGATGCGCGCGCAGCGCCAGCGCGAAGTCGTCCAGGCGCTGATGGCCGTGCT
GCCGACGCACTGCCTGCTGTATCGCGACGAAGACACCGCACCGTACGAATGCGACGGCCTGTCGGCATACCGCCGTCTGC
CGCTCGCGGTCGCACTGCCCGAAACCGAATCGCAGGTGCAGCGCATCGTGCAGATCTGCCGCCGCATGGACGTGCCGATC
GTGCCGCGCGGCGCCGGCACGAGCCTGTCCGGCGGCGCGCTGCCGATCTCGCTCGGCGTCGTGCTGTCGCTCGCGCGCTT
CACGCGCATCGTCGAAGTCGATCCCTATGCGCGCACCGCCACCGTCCAGCCCGGCGTGCGCAATCTCGCGATCTCCGAAG
CGGCCGCACCGTACGGGCTGTACTACGCGCCCGATCCGTCCTCGCAGATCGCCTGCACGATCGGCGGCAACGTCGCGGAA
AATTCGGGCGGCGTCCACTGCCTCAAGTACGGACTCACCGTGCACAACGTGATGCGCGTGCGCGCCGTGACGATCGACGG
CGAAATCGTCGAATTCGGCTCGCTCGCGCTCGACATGCCGGGCCTCGACCTGCTCGCCGTGATGATCGGCAGCGAAGGGA
TGTTCGCGATCGTCACCGAAGTGACGGTGAAGCTGATCCCGAAACCGCAGGCGGCGCAGCTCGTGATGGCGAGCTTCGAC
GACGTCGTCAAGGGCGGCGAGGCCGTCGCCGCGATCATCGCGTCCGGCATCATCCCGGCCGGCCTCGAGATGATGGACAA
GCCGGCGACGCAGGCCGTCGAGGCGTTCACGCACGCCGGCTACGACCTCGACGCGAAAGCGATCCTGCTGTGCGAATCGG
ACGGCACGCCCGAAGAAGTCGCCGAGGAAATCGTGCGGATGACGGCCGTGCTGCGCGAGCACGGCGCGACGCGCATCCAG
GTCTCGCGCAACGAAAGCGAGCGGCTGCGCTTCTGGTCCGGCCGCAAGAACGCGTTTCCGGCCGCCGGGCGCATCTCGCC
CGACTATTACTGCATGGACGGCACCGTGCCGCGCCGCGCGATCGGCCCGCTGCTCGCGCGCATCGAACAGCTCGAAACGC
GCTACGGCTTGCGCTGCATCAACGTGTTCCATGCCGGCGACGGGAACATGCATCCGCTGATTCTGTACAACGCGAACAAT
CCGGACGAGCTCCATCGCGCCGAGCAGTTCGGCGCGGAAATTCTCGAATGCTGCGTCGAATTCGGCGGCAGCGTGACCGG
CGAGCACGGCGTCGGCATCGAGAAACTGAACTCGATGTGCGTCCAGTTCTCGCCGCAGGAGCGCGACGCGTTCTTCGCGG
TCAAGCGCGCATTCGATCCGCCGGAGCTGCTCAATCCCGACAAGGGCATTCCGACCCGCGCACGCTGCGCCGAATACGGA
CGCCAGCACGTGCGCGGCGGGCTGCTGCCGCACCCCGATCTGCCGCGCTTCTAG

Upstream 100 bases:

>100_bases
GCTGATGCGGCGGCGAAGCGGCGGCCGCGGCCGCCGCCGTGCTTTGCCTGGGACGGGAGTAAGCGCTAAAGCGCTAACTC
CCGTCGCAAAAGGAGACCCG

Downstream 100 bases:

>100_bases
GCGCGCGTGCCGGCCGCCGCCCGGCCGGCTTCAGGAAGCGCCCGGCGTCGCCGCGCGGTATCGCGTGGCGTGGCGCGGGC
TCGCGCGCGCCGCCTGCGCA

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNAPVELSAQMRAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMDVPI
VPRGAGTSLSGGALPISLGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEIVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVKLIPKPQAAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNESERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANN
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF

Sequences:

>Translated_497_residues
MNAPVELSAQMRAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMDVPI
VPRGAGTSLSGGALPISLGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEIVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVKLIPKPQAAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNESERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANN
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF
>Mature_497_residues
MNAPVELSAQMRAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALPETESQVQRIVQICRRMDVPI
VPRGAGTSLSGGALPISLGVVLSLARFTRIVEVDPYARTATVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NSGGVHCLKYGLTVHNVMRVRAVTIDGEIVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVKLIPKPQAAQLVMASFD
DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEVAEEIVRMTAVLREHGATRIQ
VSRNESERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRAIGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANN
PDELHRAEQFGAEILECCVEFGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG
RQHVRGGLLPHPDLPRF

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=474, Percent_Identity=26.1603375527426, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI37595754, Length=497, Percent_Identity=25.7545271629779, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI119964728, Length=440, Percent_Identity=25.4545454545455, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI4501993, Length=235, Percent_Identity=27.2340425531915, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI1789351, Length=479, Percent_Identity=60.7515657620042, Blast_Score=604, Evalue=1e-174,
Organism=Escherichia coli, GI1787977, Length=524, Percent_Identity=24.4274809160305, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI48994907, Length=443, Percent_Identity=24.1534988713318, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71992373, Length=429, Percent_Identity=26.1072261072261, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71992381, Length=429, Percent_Identity=24.9417249417249, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992392, Length=369, Percent_Identity=25.2032520325203, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17534361, Length=446, Percent_Identity=24.8878923766816, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17556096, Length=456, Percent_Identity=21.2719298245614, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320027, Length=431, Percent_Identity=27.8422273781903, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6320023, Length=460, Percent_Identity=28.9130434782609, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320764, Length=458, Percent_Identity=25.3275109170306, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI18921117, Length=452, Percent_Identity=28.5398230088496, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24639277, Length=452, Percent_Identity=28.5398230088496, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24639275, Length=452, Percent_Identity=28.5398230088496, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24653753, Length=222, Percent_Identity=26.5765765765766, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53902; Mature: 53902

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVELSAQMRAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHCCEEEECC
ETESQVQRIVQICRRMDVPIVPRGAGTSLSGGALPISLGVVLSLARFTRIVEVDPYARTA
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEE
TVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRV
ECCCCHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEECCCCCEEEEEECCHHHHEEEE
RAVTIDGEIVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVKLIPKPQAAQLVMASFD
EEEEECCCEEECCCEEECCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHH
DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEV
HHHCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
AEEIVRMTAVLREHGATRIQVSRNESERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRA
HHHHHHHHHHHHHCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCCEEEECCCCCHHH
IGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANNPDELHRAEQFGAEILECCVE
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
FGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG
HCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHH
RQHVRGGLLPHPDLPRF
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPVELSAQMRAQRQREVVQALMAVLPTHCLLYRDEDTAPYECDGLSAYRRLPLAVALP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHCCEEEECC
ETESQVQRIVQICRRMDVPIVPRGAGTSLSGGALPISLGVVLSLARFTRIVEVDPYARTA
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEE
TVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVMRV
ECCCCHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEECCCCCEEEEEECCHHHHEEEE
RAVTIDGEIVEFGSLALDMPGLDLLAVMIGSEGMFAIVTEVTVKLIPKPQAAQLVMASFD
EEEEECCCEEECCCEEECCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHH
DVVKGGEAVAAIIASGIIPAGLEMMDKPATQAVEAFTHAGYDLDAKAILLCESDGTPEEV
HHHCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
AEEIVRMTAVLREHGATRIQVSRNESERLRFWSGRKNAFPAAGRISPDYYCMDGTVPRRA
HHHHHHHHHHHHHCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCCEEEECCCCCHHH
IGPLLARIEQLETRYGLRCINVFHAGDGNMHPLILYNANNPDELHRAEQFGAEILECCVE
HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
FGGSVTGEHGVGIEKLNSMCVQFSPQERDAFFAVKRAFDPPELLNPDKGIPTRARCAEYG
HCCCCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHH
RQHVRGGLLPHPDLPRF
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]