| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is yyaM [H]
Identifier: 161525723
GI number: 161525723
Start: 2779745
End: 2780635
Strand: Reverse
Name: yyaM [H]
Synonym: Bmul_2554
Alternate gene names: 161525723
Gene position: 2780635-2779745 (Counterclockwise)
Preceding gene: 161525725
Following gene: 161525721
Centisome position: 80.63
GC content: 67.68
Gene sequence:
>891_bases ATGAACCTGTCGCTCTATATCGTTACCGTGCTGATCTGGGGAACCACCTGGATCGCGATCAAATGGCAGCTCGGCAGCGT GCCGCCGCCCGTGTCGATCGCGTGGCGCTTCTGGCTCGCGGCCGCCGTGATGTTCGCGCTGCTGCGCGCGATGCGTCGCC CCGCGCGGCCGCCGCGCGCCGCGTGGCGTTATCTCGCCGCGCAGGGCGTTGCGCTGTTCTGCCTGAATTTCCTGTGCTTC TACTACGCGGAGCGCGTCGTGCCGAGCGGCCTCGTCGCGGTGATTTTCTCGACCGCGCCGCTGCTCAATTCGATCAACGG GCGGCTGTTCATGGGGCGGCCGCTGCGCGCGTCGGCGATTGCGGGCGCGCTGCTCGGCCTGACCGGCATCGCCTGCCTGT TCTGGCAGCAGATGGCCGGCCATCTCGACGATCGCGCGACATGGATCGGGCTCGCGATCGCATTTGCGGGGACGATGTGC TTCTCGGCCGGCAACCTGCTGTCGAGCCGCATGCAGTCGATGGGCCTGCATCCGCTCGCGACGAACGGCTGGGCGATGCT GATCGGCGCGGCGATTCTGACCGTCGGCAGCGTGGCGGCCGGGCTGCCGTTTTCGCTCGAAATGGAGCCGCGCTATCTCG GCGCGCTGCTCTATCTGGCCGTGCCGGGCTCGGTGATCGGCTTTACCGCTTATCTGACGCTCGTCGGCCGGATTGGGCCG GAGCGCGCCGCGTACTGCACGGTGTTGTTTCCGATCGTCGCGCTGGCCGTGTCGACGGTGTTCGAAGGATATCGATGGTC GCCGCTCGCGGTGATCGGGCTGCTGCTCGTGCTGGCCGGGAATCTCGTTGCGTTCGATCTTGTGCGGCGGTTGGCGCCGC GGACAGCGTGA
Upstream 100 bases:
>100_bases CGGGCGCCGGCGAAAAAGACCGCAATTCCGGACAATCGGCACGCGTCGTGCGACGGCATAGTCGGATTCCCGTTTCGTTT GAAGCCTCGTCGCCGTCGCC
Downstream 100 bases:
>100_bases CGGAAGCGGCCGTCGCTATGGCATACCGACAACAAAATGCCCGCACGAAGCGGGCATTTTCCTTCTGGCGGCGCGCGGAC ATCCGCGTTCGGCTTGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNLSLYIVTVLIWGTTWIAIKWQLGSVPPPVSIAWRFWLAAAVMFALLRAMRRPARPPRAAWRYLAAQGVALFCLNFLCF YYAERVVPSGLVAVIFSTAPLLNSINGRLFMGRPLRASAIAGALLGLTGIACLFWQQMAGHLDDRATWIGLAIAFAGTMC FSAGNLLSSRMQSMGLHPLATNGWAMLIGAAILTVGSVAAGLPFSLEMEPRYLGALLYLAVPGSVIGFTAYLTLVGRIGP ERAAYCTVLFPIVALAVSTVFEGYRWSPLAVIGLLLVLAGNLVAFDLVRRLAPRTA
Sequences:
>Translated_296_residues MNLSLYIVTVLIWGTTWIAIKWQLGSVPPPVSIAWRFWLAAAVMFALLRAMRRPARPPRAAWRYLAAQGVALFCLNFLCF YYAERVVPSGLVAVIFSTAPLLNSINGRLFMGRPLRASAIAGALLGLTGIACLFWQQMAGHLDDRATWIGLAIAFAGTMC FSAGNLLSSRMQSMGLHPLATNGWAMLIGAAILTVGSVAAGLPFSLEMEPRYLGALLYLAVPGSVIGFTAYLTLVGRIGP ERAAYCTVLFPIVALAVSTVFEGYRWSPLAVIGLLLVLAGNLVAFDLVRRLAPRTA >Mature_296_residues MNLSLYIVTVLIWGTTWIAIKWQLGSVPPPVSIAWRFWLAAAVMFALLRAMRRPARPPRAAWRYLAAQGVALFCLNFLCF YYAERVVPSGLVAVIFSTAPLLNSINGRLFMGRPLRASAIAGALLGLTGIACLFWQQMAGHLDDRATWIGLAIAFAGTMC FSAGNLLSSRMQSMGLHPLATNGWAMLIGAAILTVGSVAAGLPFSLEMEPRYLGALLYLAVPGSVIGFTAYLTLVGRIGP ERAAYCTVLFPIVALAVSTVFEGYRWSPLAVIGLLLVLAGNLVAFDLVRRLAPRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=275, Percent_Identity=24, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31892; Mature: 31892
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSLYIVTVLIWGTTWIAIKWQLGSVPPPVSIAWRFWLAAAVMFALLRAMRRPARPPRA CCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AWRYLAAQGVALFCLNFLCFYYAERVVPSGLVAVIFSTAPLLNSINGRLFMGRPLRASAI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH AGALLGLTGIACLFWQQMAGHLDDRATWIGLAIAFAGTMCFSAGNLLSSRMQSMGLHPLA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNGWAMLIGAAILTVGSVAAGLPFSLEMEPRYLGALLYLAVPGSVIGFTAYLTLVGRIGP CCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ERAAYCTVLFPIVALAVSTVFEGYRWSPLAVIGLLLVLAGNLVAFDLVRRLAPRTA CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLSLYIVTVLIWGTTWIAIKWQLGSVPPPVSIAWRFWLAAAVMFALLRAMRRPARPPRA CCCHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AWRYLAAQGVALFCLNFLCFYYAERVVPSGLVAVIFSTAPLLNSINGRLFMGRPLRASAI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH AGALLGLTGIACLFWQQMAGHLDDRATWIGLAIAFAGTMCFSAGNLLSSRMQSMGLHPLA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TNGWAMLIGAAILTVGSVAAGLPFSLEMEPRYLGALLYLAVPGSVIGFTAYLTLVGRIGP CCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC ERAAYCTVLFPIVALAVSTVFEGYRWSPLAVIGLLLVLAGNLVAFDLVRRLAPRTA CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]