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The map label for this gene is ydaL [C]

Identifier: 161525595

GI number: 161525595

Start: 2638808

End: 2639686

Strand: Direct

Name: ydaL [C]

Synonym: Bmul_2425

Alternate gene names: 161525595

Gene position: 2638808-2639686 (Clockwise)

Preceding gene: 161525594

Following gene: 161525596

Centisome position: 76.52

GC content: 72.92

Gene sequence:

>879_bases
ATGGCGGCCGCTGCCGCGAAGCAGGCCAGGCCGGAGCCGCTGCCCGTCGCGCAGCGGCTTTTTTGTGCCCGCGCGCCCCG
GCGCTGCATTGCGTATCGAATCATGGCGAAGAATCAGCCCCATCCGAGCGATCCCGCGAAGCGGCAGATCGCCGCCCGTC
CCGCCGCCGCGCCCGTCGCGCCGCCGCCTGCCGTCGAACCGGCCGCATTGCGCGGCCAGGGTCTCGCCGGCCTCGCCGCG
TTGCGCCAGGCGCTGCAAGGCGAAGCCGAGCGCCGCGAGCGCACGCGCGTCGAAACCGTCAAGGCCGCGCGCCAGGCCGA
AGCCGACGCGAACCTGTTCCGCAACGAGATCGGCGCCGTGCGCCCGCTGAACGCGCCGCCGCGCGCGGCGTCCGGCCGCG
TCCCGCCGCCGCCCGTGCCGAAGCAGACGCAGCGCGACGAGGAAGCGGTGCTGAACGCGACGCTGTCCGACGAGTTCGAT
CCCGAGACGCTGCTCGACAGCGACGAATCGCTGTATTACCACCGCCCCGGCATCAGCCGCGACGTCGTGCGCAAGCTGCG
CAGCGGCGCATGGATCGTGCAGGCGCAACTCGATCTGCACGGGATGCGCCGCGACGAGGCGCGCGAGGCGCTGGCCGAAT
TCATCCGCGAAGCCGGCAAGAAGGGGCTGCGCTGCCTGCGCGTGATCCACGGCAAGGGGCTCGGCTCGATCGGCAAGGAG
CCGGTGCTGAAGGGCAAGGTCCGTGCGTGGCTCGTGCAGAAGGAAGAAGTGATCGCGTTCTGCGAGGCGCGCGGCCACGA
CGGCGGTGCGGGCGCGGTGCTCGTGCTGCTGCAGCCGCTCGCGGCATCCGCCGAGCGGGGACCGCGTGCCGCATCCTAG

Upstream 100 bases:

>100_bases
CGCCGGCACCGGCTGCATGGCCGCGCTCGACGCACAGCGCTACCTCGAAAGCCTGCACGACAAGAAGTAAGCCGCAAGCG
CCGCCGCGTCGGGCGCTACA

Downstream 100 bases:

>100_bases
GCTCACGCTCGCGATCGCGGTACTCGAAGCGATCGCCACGCTCGCCTTCGCGATCTCCGGCTTCATCGAAGCGCGCAAGA
ACCGGCTCGACTCGGTCGGC

Product: Smr protein/MutS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAAAAAKQARPEPLPVAQRLFCARAPRRCIAYRIMAKNQPHPSDPAKRQIAARPAAAPVAPPPAVEPAALRGQGLAGLAA
LRQALQGEAERRERTRVETVKAARQAEADANLFRNEIGAVRPLNAPPRAASGRVPPPPVPKQTQRDEEAVLNATLSDEFD
PETLLDSDESLYYHRPGISRDVVRKLRSGAWIVQAQLDLHGMRRDEAREALAEFIREAGKKGLRCLRVIHGKGLGSIGKE
PVLKGKVRAWLVQKEEVIAFCEARGHDGGAGAVLVLLQPLAASAERGPRAAS

Sequences:

>Translated_292_residues
MAAAAAKQARPEPLPVAQRLFCARAPRRCIAYRIMAKNQPHPSDPAKRQIAARPAAAPVAPPPAVEPAALRGQGLAGLAA
LRQALQGEAERRERTRVETVKAARQAEADANLFRNEIGAVRPLNAPPRAASGRVPPPPVPKQTQRDEEAVLNATLSDEFD
PETLLDSDESLYYHRPGISRDVVRKLRSGAWIVQAQLDLHGMRRDEAREALAEFIREAGKKGLRCLRVIHGKGLGSIGKE
PVLKGKVRAWLVQKEEVIAFCEARGHDGGAGAVLVLLQPLAASAERGPRAAS
>Mature_291_residues
AAAAAKQARPEPLPVAQRLFCARAPRRCIAYRIMAKNQPHPSDPAKRQIAARPAAAPVAPPPAVEPAALRGQGLAGLAAL
RQALQGEAERRERTRVETVKAARQAEADANLFRNEIGAVRPLNAPPRAASGRVPPPPVPKQTQRDEEAVLNATLSDEFDP
ETLLDSDESLYYHRPGISRDVVRKLRSGAWIVQAQLDLHGMRRDEAREALAEFIREAGKKGLRCLRVIHGKGLGSIGKEP
VLKGKVRAWLVQKEEVIAFCEARGHDGGAGAVLVLLQPLAASAERGPRAAS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1787602, Length=184, Percent_Identity=32.0652173913043, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1788671, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 31493; Mature: 31361

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAAAKQARPEPLPVAQRLFCARAPRRCIAYRIMAKNQPHPSDPAKRQIAARPAAAPVA
CCCCCCHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCC
PPPAVEPAALRGQGLAGLAALRQALQGEAERRERTRVETVKAARQAEADANLFRNEIGAV
CCCCCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPLNAPPRAASGRVPPPPVPKQTQRDEEAVLNATLSDEFDPETLLDSDESLYYHRPGISR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCH
DVVRKLRSGAWIVQAQLDLHGMRRDEAREALAEFIREAGKKGLRCLRVIHGKGLGSIGKE
HHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVLKGKVRAWLVQKEEVIAFCEARGHDGGAGAVLVLLQPLAASAERGPRAAS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AAAAAKQARPEPLPVAQRLFCARAPRRCIAYRIMAKNQPHPSDPAKRQIAARPAAAPVA
CCCCCHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCC
PPPAVEPAALRGQGLAGLAALRQALQGEAERRERTRVETVKAARQAEADANLFRNEIGAV
CCCCCCCHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RPLNAPPRAASGRVPPPPVPKQTQRDEEAVLNATLSDEFDPETLLDSDESLYYHRPGISR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCH
DVVRKLRSGAWIVQAQLDLHGMRRDEAREALAEFIREAGKKGLRCLRVIHGKGLGSIGKE
HHHHHHHCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVLKGKVRAWLVQKEEVIAFCEARGHDGGAGAVLVLLQPLAASAERGPRAAS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA