Click here to switch to the map view.

The map label for this gene is 161525522

Identifier: 161525522

GI number: 161525522

Start: 2561142

End: 2561426

Strand: Direct

Name: 161525522

Synonym: Bmul_2352

Alternate gene names: NA

Gene position: 2561142-2561426 (Clockwise)

Preceding gene: 161525521

Following gene: 161525523

Centisome position: 74.27

GC content: 68.07

Gene sequence:

>285_bases
ATGAGCGCCGCCAACGAAGGAGCGCCGGGCTTCGCGTCCGGATTCGAGATCCCGCTGCATCGCTCGCTGACCGAGCCGAT
CCTGCTGGGCGGTGCGCCGCGCACCGTGGCGATCGCCAACGGCACGCTGGCTGCCGCCGTCGGGCTGGGTCTGCAACTGT
GGATTCCCGGTGCGGTGCTCTGGATCGTCGGCCATTCGCTGGCGGTCTGGGGCGCGCGTGTCGATCCGCAGTTCATGCAG
GTCTTCGCTCGGCACATCAAGCACAAGCCGCTGCTGGACGTATAG

Upstream 100 bases:

>100_bases
GCTTTCGCAAGCTGATCCAGATCGTGTTCGGCCTGTCCATCGCGTTCGCCGCGTCCTCGTTCTTCCTGTCGTTCTTCAGC
TTCTCCGGCGGGGCCGTCGT

Downstream 100 bases:

>100_bases
GGGACGCCGCCATGCTGAATCTTGCCGAATACCGCCAGCGGCCCGCGCTGCTGGCCGACTGGCTTCCGTGGGCCGGCTTG
GTCGCGCCGGGCATCGTCTT

Product: putative conjugal transfer TrbD transmembrane protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbB; Conjugal Transfer Protein; Conjugal Transfer TrbD Transmembrane Protein; Type IV Secretory Pathway VirB3 Family Protein; Conjugal Transfer Trbd Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type Iv Secretory Pathway Virb3 Family Protein; Conjugal Transfer Protein Trbd; Type IV Secretory Pathway TrbD Component-Like Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSAANEGAPGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVLWIVGHSLAVWGARVDPQFMQ
VFARHIKHKPLLDV

Sequences:

>Translated_94_residues
MSAANEGAPGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVLWIVGHSLAVWGARVDPQFMQ
VFARHIKHKPLLDV
>Mature_93_residues
SAANEGAPGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVLWIVGHSLAVWGARVDPQFMQV
FARHIKHKPLLDV

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9872; Mature: 9740

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAANEGAPGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHCCEEECCCHHHH
WIVGHSLAVWGARVDPQFMQVFARHIKHKPLLDV
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAANEGAPGFASGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVL
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHCCEEECCCHHHH
WIVGHSLAVWGARVDPQFMQVFARHIKHKPLLDV
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA