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The map label for this gene is copD [H]

Identifier: 161525511

GI number: 161525511

Start: 2550682

End: 2551635

Strand: Direct

Name: copD [H]

Synonym: Bmul_2341

Alternate gene names: 161525511

Gene position: 2550682-2551635 (Clockwise)

Preceding gene: 161525510

Following gene: 161525512

Centisome position: 73.97

GC content: 66.35

Gene sequence:

>954_bases
ATGGAGGGTTGGGGCAACATCGTTGTCCGCTTCGCCAGCTACGCTGACCTGATGCTGCTGTTCGGGCTGCCGCTGTTCGG
CCTGTACGGCGTGAAGGGCAGCGCAGCCGACGCCCATGCAGCCTTCGGTTATCGAAGGCTGCTGTCCTGGCTCGCGGGCG
TGGGTCTGCTGGTGTCGGGCGCCGGCATGCTGATGCTGGCGGTGACCATGAGCGGTGTGACTGAGATCGGGGAGCTTCAA
CGCCATGTGTTCGGCATGATCATCACCGGCACCAACGTCGGCATCGCGTGGGTGGTCAAGATCGCAGCGCTTGTGGGCAT
CCTGCTTTGCGCCGGGTTCTACAGACGGGTGCCCACGGCGAGCCTGGTGCTCGCTTCCTTGTTCGCCGCGGTCGGTCTGT
CCACGCTGGTCTGGTCGGGACATGGGGCGATGGATACCGGCACACGCGGCGGCATCCATCTGGCGGCCGACACCTTGCAC
CTGCTCGGTGCTGGCGCCTGGCTGGGGGCGCTGGCCGCGTTTCTGCTGTTGCTGCTGCGCCCGGTCCAGGGCCAGGGCCG
CGACGACGCCTACCAGCATCTGCTGCTCCTGCGCCAGGCGGTAACCGGGTTTTCGTCGGCTGGCACGCTCATCGTCGCGG
TGCTGATCGTCACCGGCATCGTCAACTATCTGCTCATCGTCGGCCCGAGTCTTGAGGGCATGGCATCTAGCCCTTACGGG
GTCTTGCTGCTGGTGAAGCTGGGCCTGTTCGGCGCCATGCTCGCGCTGGCCGCGGCGAATCGCTTTCGGCTGGGGCCGCT
GCTGGAGCGGGCACGCAGCTCCATCGACATCGCACGCGCCAAGCGTGCCCTGTGCAACAGCCTGGCGATCGAGACGACGG
CCATGATGCTGATCCTGCTGGCAGTGGCCTGGCTGGGCACCTTGAGTCCACCCGGCAACACGAGACCCTACTGA

Upstream 100 bases:

>100_bases
CAAGCCCCTGATGACGGGGGACTATCGCGTGGAGTGGCGCGCCGTGTCGGCCGATACCCATCCCATAACGGGCAACTTCT
CCTTCAAGGTGAAGTGAGCC

Downstream 100 bases:

>100_bases
TTTCGACAGGCATGGTCGGCGCCCGATGCGCCGACCTTTTGAAGGAAGGTTCATCATGAACGAGCATCACGGTCACAACG
AATCGCCCCCACGTTTCTGG

Product: copper resistance D domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MEGWGNIVVRFASYADLMLLFGLPLFGLYGVKGSAADAHAAFGYRRLLSWLAGVGLLVSGAGMLMLAVTMSGVTEIGELQ
RHVFGMIITGTNVGIAWVVKIAALVGILLCAGFYRRVPTASLVLASLFAAVGLSTLVWSGHGAMDTGTRGGIHLAADTLH
LLGAGAWLGALAAFLLLLLRPVQGQGRDDAYQHLLLLRQAVTGFSSAGTLIVAVLIVTGIVNYLLIVGPSLEGMASSPYG
VLLLVKLGLFGAMLALAAANRFRLGPLLERARSSIDIARAKRALCNSLAIETTAMMLILLAVAWLGTLSPPGNTRPY

Sequences:

>Translated_317_residues
MEGWGNIVVRFASYADLMLLFGLPLFGLYGVKGSAADAHAAFGYRRLLSWLAGVGLLVSGAGMLMLAVTMSGVTEIGELQ
RHVFGMIITGTNVGIAWVVKIAALVGILLCAGFYRRVPTASLVLASLFAAVGLSTLVWSGHGAMDTGTRGGIHLAADTLH
LLGAGAWLGALAAFLLLLLRPVQGQGRDDAYQHLLLLRQAVTGFSSAGTLIVAVLIVTGIVNYLLIVGPSLEGMASSPYG
VLLLVKLGLFGAMLALAAANRFRLGPLLERARSSIDIARAKRALCNSLAIETTAMMLILLAVAWLGTLSPPGNTRPY
>Mature_317_residues
MEGWGNIVVRFASYADLMLLFGLPLFGLYGVKGSAADAHAAFGYRRLLSWLAGVGLLVSGAGMLMLAVTMSGVTEIGELQ
RHVFGMIITGTNVGIAWVVKIAALVGILLCAGFYRRVPTASLVLASLFAAVGLSTLVWSGHGAMDTGTRGGIHLAADTLH
LLGAGAWLGALAAFLLLLLRPVQGQGRDDAYQHLLLLRQAVTGFSSAGTLIVAVLIVTGIVNYLLIVGPSLEGMASSPYG
VLLLVKLGLFGAMLALAAANRFRLGPLLERARSSIDIARAKRALCNSLAIETTAMMLILLAVAWLGTLSPPGNTRPY

Specific function: Exact function not known. Involved in copper resistance. Appears to be involved in copper uptake in conjunction with CopC [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopD family [H]

Homologues:

Organism=Escherichia coli, GI1788145, Length=312, Percent_Identity=28.2051282051282, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008457 [H]

Pfam domain/function: PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 33139; Mature: 33139

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWGNIVVRFASYADLMLLFGLPLFGLYGVKGSAADAHAAFGYRRLLSWLAGVGLLVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
AGMLMLAVTMSGVTEIGELQRHVFGMIITGTNVGIAWVVKIAALVGILLCAGFYRRVPTA
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLVLASLFAAVGLSTLVWSGHGAMDTGTRGGIHLAADTLHLLGAGAWLGALAAFLLLLLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVQGQGRDDAYQHLLLLRQAVTGFSSAGTLIVAVLIVTGIVNYLLIVGPSLEGMASSPYG
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VLLLVKLGLFGAMLALAAANRFRLGPLLERARSSIDIARAKRALCNSLAIETTAMMLILL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAWLGTLSPPGNTRPY
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEGWGNIVVRFASYADLMLLFGLPLFGLYGVKGSAADAHAAFGYRRLLSWLAGVGLLVSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
AGMLMLAVTMSGVTEIGELQRHVFGMIITGTNVGIAWVVKIAALVGILLCAGFYRRVPTA
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLVLASLFAAVGLSTLVWSGHGAMDTGTRGGIHLAADTLHLLGAGAWLGALAAFLLLLLR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PVQGQGRDDAYQHLLLLRQAVTGFSSAGTLIVAVLIVTGIVNYLLIVGPSLEGMASSPYG
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VLLLVKLGLFGAMLALAAANRFRLGPLLERARSSIDIARAKRALCNSLAIETTAMMLILL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAWLGTLSPPGNTRPY
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 8449873 [H]