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The map label for this gene is radC [C]

Identifier: 161525489

GI number: 161525489

Start: 2530274

End: 2530783

Strand: Direct

Name: radC [C]

Synonym: Bmul_2319

Alternate gene names: 161525489

Gene position: 2530274-2530783 (Clockwise)

Preceding gene: 161525483

Following gene: 161525490

Centisome position: 73.37

GC content: 64.12

Gene sequence:

>510_bases
ATGTCGCAACTGTCCATTCCTTCCTTCGATGCCCCGCTGATGCTGCGTGACTCGCGCGGGCGCTACCGTCAGGCATCGGC
CGACCAGATTCTCGAAGCCGCGCGCCAGGTCATCGACCAGAAGATGCAGCGCGGTGACGAGTTCACTTCGCCGGCGGCGG
TCAAGGACTACTTGCGCGCCAAGCTGGCCGGTTTCGAGCACGAAGTCTTCGCGGTGTTGTTCCTCGATACGCGCCATCGG
CTGATCGACTATGCCGAGATGTTCCGCGGCACGATCGACAGCGCAGAGGTTCATCCGCGCGAAGTGGTCAAGGAGGCGCT
GCGGCTCAACGCGGCGGCGGTCATCATTTCGCACAATCACCCGAGCGGGAACCCCGAGCCGAGCGCGGCCGACAGGGCAA
TGACCTCGCAGCTTCGGCAGGCGCTGGCGCTGGTGGACGTTCGCACGTTGGATCACATCATCGTGGCGGGCGGCACCACC
ACGTCTTTCGCCGAACGTGGCTTGATCTGA

Upstream 100 bases:

>100_bases
ACGCTTGCGGCCGCGGCCGTCTTCGCCCCTGTGACGGCTTGCGCTGCGCCGTGCTGGCGCCGGTTCCGGGCAATTCCGCC
CGAGCAACCGGAGCACGATC

Downstream 100 bases:

>100_bases
TCGAGGGGGCTTCGGCCCCCTTTTTGCTGCGCCCGGTGGCGCAGCTCCGGCCCTCGCGGGCCTGCGCGTGCTGCGCACTT
GCCAAAGGCAGGTGTGGGTG

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSQLSIPSFDAPLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHR
LIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALALVDVRTLDHIIVAGGTT
TSFAERGLI

Sequences:

>Translated_169_residues
MSQLSIPSFDAPLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHR
LIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALALVDVRTLDHIIVAGGTT
TSFAERGLI
>Mature_168_residues
SQLSIPSFDAPLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRL
IDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALALVDVRTLDHIIVAGGTTT
SFAERGLI

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI87082300, Length=145, Percent_Identity=42.7586206896552, Blast_Score=144, Evalue=2e-36,
Organism=Escherichia coli, GI1788997, Length=145, Percent_Identity=48.9655172413793, Blast_Score=143, Evalue=5e-36,
Organism=Escherichia coli, GI2367100, Length=142, Percent_Identity=49.2957746478873, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1788312, Length=141, Percent_Identity=48.2269503546099, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18726; Mature: 18594

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLSIPSFDAPLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRA
CCCCCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KLAGFEHEVFAVLFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCC
PSGNPEPSAADRAMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCC
>Mature Secondary Structure 
SQLSIPSFDAPLMLRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRA
CCCCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KLAGFEHEVFAVLFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNH
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCC
PSGNPEPSAADRAMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]