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The map label for this gene is arrD [H]

Identifier: 161524970

GI number: 161524970

Start: 1986232

End: 1986729

Strand: Reverse

Name: arrD [H]

Synonym: Bmul_1797

Alternate gene names: 161524970

Gene position: 1986729-1986232 (Counterclockwise)

Preceding gene: 161524971

Following gene: 161524969

Centisome position: 57.61

GC content: 65.66

Gene sequence:

>498_bases
ATGGCTAACGTACCGAAGAAAACACTCGCTGGTGTTGTGGGGGCTGCTGCGGCGGCCCTTCTTTTTTCCATGGTCCCGAA
GTTCGAGGGGGAGATGTTGGTCGCCGGACCGGACCCGATCGGGATCATCACGGGATGCTTCGGTGATACGAAGGACGTGA
AGCTCGGGCAGCGCTTCACGCACGACCAATGCATCGCCCGTCTTGAGCAGCGGCTCATCGAACATGCCGAGCCAGTGCTG
AAGTGCACGCCCGGCCTGAAGGGCCACACGTACCAGCTCGCGGCGGCCGTGAGCTTTGCCTACAACGTCGGCAGCGGTGC
GTACTGCGGCAGCACGACTGCGAAGCGGTTCAACGCCGGCGACTGGAAGGGCGCGTGCCGCGCGCTGAACGAGGCCGACA
ACGGCCGGCCGCAGTGGGTGACGGCCGGCGGCCGTGTGCTGCCCGGCTTGGTGAAACGTCGCGCCGAAGAGCGCGCATTG
TGCGAGCGCGGCCTATGA

Upstream 100 bases:

>100_bases
GGCCACGACATCAACTGGTGGGTAGCCGTCGCGACGATCGCGTACATCGGGCTGCAGGCGTACTACCTGGTCAAGAACAA
GGGGAAGAGGGCATTGCTCG

Downstream 100 bases:

>100_bases
CGACGAACACTCACGAAACGCGACGCACGCTGTCCGAGGACGTCTTCTACCCGGACCACGAGCCGCGCACGGAATCGCCG
ACGTTCCGCGCGAGCAAGCG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MANVPKKTLAGVVGAAAAALLFSMVPKFEGEMLVAGPDPIGIITGCFGDTKDVKLGQRFTHDQCIARLEQRLIEHAEPVL
KCTPGLKGHTYQLAAAVSFAYNVGSGAYCGSTTAKRFNAGDWKGACRALNEADNGRPQWVTAGGRVLPGLVKRRAEERAL
CERGL

Sequences:

>Translated_165_residues
MANVPKKTLAGVVGAAAAALLFSMVPKFEGEMLVAGPDPIGIITGCFGDTKDVKLGQRFTHDQCIARLEQRLIEHAEPVL
KCTPGLKGHTYQLAAAVSFAYNVGSGAYCGSTTAKRFNAGDWKGACRALNEADNGRPQWVTAGGRVLPGLVKRRAEERAL
CERGL
>Mature_164_residues
ANVPKKTLAGVVGAAAAALLFSMVPKFEGEMLVAGPDPIGIITGCFGDTKDVKLGQRFTHDQCIARLEQRLIEHAEPVLK
CTPGLKGHTYQLAAAVSFAYNVGSGAYCGSTTAKRFNAGDWKGACRALNEADNGRPQWVTAGGRVLPGLVKRRAEERALC
ERGL

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=140, Percent_Identity=35.7142857142857, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 17514; Mature: 17383

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVPKKTLAGVVGAAAAALLFSMVPKFEGEMLVAGPDPIGIITGCFGDTKDVKLGQRFT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCHHCHHCC
HDQCIARLEQRLIEHAEPVLKCTPGLKGHTYQLAAAVSFAYNVGSGAYCGSTTAKRFNAG
HHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
DWKGACRALNEADNGRPQWVTAGGRVLPGLVKRRAEERALCERGL
CHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANVPKKTLAGVVGAAAAALLFSMVPKFEGEMLVAGPDPIGIITGCFGDTKDVKLGQRFT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCHHCHHCC
HDQCIARLEQRLIEHAEPVLKCTPGLKGHTYQLAAAVSFAYNVGSGAYCGSTTAKRFNAG
HHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
DWKGACRALNEADNGRPQWVTAGGRVLPGLVKRRAEERALCERGL
CHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]