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The map label for this gene is hofB [C]

Identifier: 161524903

GI number: 161524903

Start: 1910967

End: 1912310

Strand: Reverse

Name: hofB [C]

Synonym: Bmul_1730

Alternate gene names: 161524903

Gene position: 1912310-1910967 (Counterclockwise)

Preceding gene: 161524904

Following gene: 161524902

Centisome position: 55.45

GC content: 63.76

Gene sequence:

>1344_bases
ATGGCACACGACATTCAATTCGCCGACGGCGCAGCGCCGTTCTCCCAGACGCAGCAGTTCCACGACATCAAGAATGCCGC
GCACGAGCATCTGCTGACGCGCATCGAGGAACTCGGCGCCGAGTTTGGCCGATGGTCCCGCCAGGCGATCAATCAGTTCG
TCGATCTGGAGGTCGACAGCTTCGTGCGCCTGCGCCGCATCCCGCTCAACGAGAACGAGGTGCGCGCGATTGCCGAGGCG
CTGACGAAGGAGCTTGCCGGTTTCGGGCCGATCGAGGACTTGCTCGCGGACCCGGCGGTCGAGGACATCCTGATCAACGG
CTTCAACGACGTGTATGTGTCGCGTCACGGCATTCTGTCCAAGCTGCCCGTGCGGTTCACCGACAACGCGCATCTGCTGC
GGATCGTACGCCGGATCCTCGCGCCGATCGGCCGTCGTCTCGACGAGTCGAACCCGATGGTCGATGCCCGGCTGCCAGAT
GGTGGCCGCGTGAACGTCGTGATCGAACCGCTGTCGCTCGCCGGTCCGATCGTTTCGATCCGGAAATTCCGCAAGGATCC
GTTGAAGCCGTCCGACCTGCTCGGCAACGGCACGTACAACGAAGAAATCGGCGCGTTGCTCGAGGCAGCTGTCGAGGCGC
GCTGCAACGTGCTCGTGTCGGGCGGCACGAGTTCCGGCAAGACGTCGCTGCTCAACGCGCTCGCATTCCATATTCCCGAG
GTCGAGCGTGTCGTGACGATCGAGGACACGGCCGAACTGTCGCTGAACCACCCGCACGTGGTGCGTCTGGAGAGCCGCCC
GGGTGGCTTCGATGGAACGGGCGTCGTGACGATCCGCGATCTGCTGCGCAACACGCTGCGGATGCGGCCGGACCGGATCA
TCGTCGGCGAAGTGCGTGGCGGTGAAGTGCTCGAGATGCTTCAGGCGATGAACACGGGCCACGACGGTTCGATGGGCACC
GTGCACGCAAGCTCCCCGCGCGAGTGTTTGTATCGCCTCGAGATGCTGGCGGGCTTTGCCGGTTTTCAAGGCACCGAGTC
GAGCCTGCGTCGGCAGATCGCGAATGCGATCGACTTCATCGTGCAGATCGGGCGTTTGTCGAATGGGCGGCGTCGGATCT
TGTCGATTACCGAAGTGACCGGCCTGTCCGACAACATCATCGCGACGCAGGAACTCTACCGCTACGAAGCACGCGTGACG
CCGGAAGGCGAGGAGATCGATCACTGGGAGTCGCTCGGCATCCATCCGCATTCGCCGAAGCTCGTGCGCTTCCGGCAGGC
GCTGGCGAACACCGGATTCGGTGGCGGTGGCGGTTTTGGTCGCGGCGGAGGCTTCAATGTATAG

Upstream 100 bases:

>100_bases
GTTGCCCGGCGTGTCGGGCATCGCGCGCACATCGCGCGTCGCCCCGGGTCTGTCCGCACTGAAACGTTTCATTCAACCTT
CGTCCAAGCGGTCGTAAGCG

Downstream 100 bases:

>100_bases
CCCGATGATATGGGTGCTCGTGGTCGCGATGCTATGCGCCGCGTCGGCACTGATGTTGTGGCGGCACGCGGAGACGCGGC
GCGTGCGAACCGATGCGAAG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEVDSFVRLRRIPLNENEVRAIAEA
LTKELAGFGPIEDLLADPAVEDILINGFNDVYVSRHGILSKLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPD
GGRVNVVIEPLSLAGPIVSIRKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPE
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVT
PEGEEIDHWESLGIHPHSPKLVRFRQALANTGFGGGGGFGRGGGFNV

Sequences:

>Translated_447_residues
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEVDSFVRLRRIPLNENEVRAIAEA
LTKELAGFGPIEDLLADPAVEDILINGFNDVYVSRHGILSKLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPD
GGRVNVVIEPLSLAGPIVSIRKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPE
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
VHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVT
PEGEEIDHWESLGIHPHSPKLVRFRQALANTGFGGGGGFGRGGGFNV
>Mature_446_residues
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEVDSFVRLRRIPLNENEVRAIAEAL
TKELAGFGPIEDLLADPAVEDILINGFNDVYVSRHGILSKLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPDG
GRVNVVIEPLSLAGPIVSIRKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPEV
ERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGTV
HASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVTP
EGEEIDHWESLGIHPHSPKLVRFRQALANTGFGGGGGFGRGGGFNV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 49098; Mature: 48966

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEVDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNENEVRAIAEALTKELAGFGPIEDLLADPAVEDILINGFNDVYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCHHHHHHHCHHH
KLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPDGGRVNVVIEPLSLAGPIVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECHHHCCHHHHH
RKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPE
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCC
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRG
CCEEEEEECCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVTPEGEEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LVRFRQALANTGFGGGGGFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHDIQFADGAAPFSQTQQFHDIKNAAHEHLLTRIEELGAEFGRWSRQAINQFVDLEVDS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FVRLRRIPLNENEVRAIAEALTKELAGFGPIEDLLADPAVEDILINGFNDVYVSRHGILS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCHHHHHHHCHHH
KLPVRFTDNAHLLRIVRRILAPIGRRLDESNPMVDARLPDGGRVNVVIEPLSLAGPIVSI
HCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECHHHCCHHHHH
RKFRKDPLKPSDLLGNGTYNEEIGALLEAAVEARCNVLVSGGTSSGKTSLLNALAFHIPE
HHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCC
VERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRG
CCEEEEEECCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
GEVLEMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFI
CHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VQIGRLSNGRRRILSITEVTGLSDNIIATQELYRYEARVTPEGEEIDHWESLGIHPHSPK
HHHHHCCCCCHHEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCH
LVRFRQALANTGFGGGGGFGRGGGFNV
HHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]