| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ychM [C]
Identifier: 161524888
GI number: 161524888
Start: 1894816
End: 1896540
Strand: Reverse
Name: ychM [C]
Synonym: Bmul_1715
Alternate gene names: 161524888
Gene position: 1896540-1894816 (Counterclockwise)
Preceding gene: 161524889
Following gene: 161524882
Centisome position: 55.0
GC content: 69.91
Gene sequence:
>1725_bases ATGACCACTGCGCCGATTCGTCCCGACGCCGGCCCGCAGCGCGCCGAGCATTTCGCCACGGCGCAGGCGTCGCCGTCGCG CGCGCGCCGCTTCGCGCTCGATGCGCTGGCCGGCATATCGATCGCGGGCCTGCTGATTCCGGAGGCCGTCGCATATGCGG GGCTCGCGAATCTGCCGCCGCAGGCGGGCCTGATCGCGCTGTTGTCGGGGCTCGTCGTCTATGCGCTCACGGGCAGCAGC CGCTTCGCGATCGTCTCCTCGACATCGTCGTCGGCCGCGGTGCTTGCGGCCACCGTGTTCGCCGAATCGGGCGTCGCGCC GGCTGCGCAGCTCGCGCTGGCCGCCGCACTCGTCGCGATGACGGGCGTGCTGTTGATACTCGCCGGCGCCGCGCGGCTCG GCGGCATGTCGGATTTCGTCGCGCGGCCCGTGTTGCGCGGCTTCACGTTCGGACTCGCGCTGACGATCGTGCTCAAGCAG TTGCCGAAAATGCTCGCGATTCCGGTGTCGCACAGCGATGCGCCGCGCGTCGCGCTCGATCTCGTCGCCGGCGTGCCGCA CGCGAACGTTGCAAGCGTCGCGCTCGGCGCGGCCGCGCTCGCGCTGCTGTTCGTGCTCGGTCGCCGCTCGCGCGTGCCGG CGACGCTCGTCGTGATCGTGTTGTCGATCGTGGCCGGCTATGTCGTCGACTGGCACCGCTACGGCATCGCAGTCGTCGGC CATATCGATCTGAGCCGCGTCGCATTCGGATTGCCGCATCTCGACCGCAATGCGTGGACGCAGACGATCGAACTCGCGTT CGCGCTGATGCTGATCCTGTATGCGGAATCGTACGGGTCGATCCGCGCCTTCGCGCTGAAGTACGGCGACAGCATTGCGC CGAACCGCGACCTCGTCGCGCTCGGCTGCGCGAATCTGGTGTCGGGCCTGCTGCACGGCATGCCGGTCGGCGCCGGTTAT TCGGCGACCTCGGCCAACGAGGCGGCCGGCGCGCAGACGCGCTTCGCCGGCCTGTGGGCGGCCGCCGTCGTCGCGCTGAT CGTATGGCTACTGCTGCCGCAGCTCGCGCGCACGCCGGAGCCGGTGCTCGCGGCGATCGTGATCTTCGCGGTCAGCCATT CGCTGCATCCGGCCGTGTTTCGGCCGTACTGGGCCTGGCATCGCGACCGGCTCGTCGTGATCGCCGCGCTGCTCGCGGTG CTCGTGCTCGGCGTGCTGCAGGGGCTGCTCGCCGCGATCGGCGTGAGCCTGCTGCTGACGCTGCGCAAGCTGTCGGAGCC GAACGTCAGCGTGCTCGGCAGGCTGCGCGACAGCCACGATTTCGTCGACATCGCGAGTCATGCGGATGCGCGGCCCGTGC CCGGCGTGCTGATCGTGCGGCCGGAAGCGCAGTTGTTCTTCGCGAACGCAGACCGGATGCTCAATCGCGTCCGCGCCCTG CTGAAAACGGCGCCTGACGTGCAGACGGTGATGCTGAGCCTCGAGGAAACGCCCGACGTCGACGGGACGACGATCGAGTC GCTGCGCACGTTCGCGGCCGAATGCGCCGCGCACGGGCTGCGGTTCACGATCGTGCGGCTGAAGCTGCACGCGCTGCATG CGTTGCGCCGCGCGGCCGACGATACGCTGCGCGACGATGCGTTGTCCGAGTTGAGCGTCGACGAGAGCCTGCAGCTCTGG CAGGCACACGGTGCGGACGGTACGGAGGGCACCGCCCCGCGATGA
Upstream 100 bases:
>100_bases ATCGCGCTGCGGCATGCGCACGATCAGGACGCGCGCTATCTGCCCGGCTGGTCGGGCGTGATCGCCGTCAAGCCGTGAGC GGCGCACGCGCCGACCGACC
Downstream 100 bases:
>100_bases GCCGCGGCGGCGCGGCCGCGACGCTCAGCCCGACAGCGCTGCGTCGGCTGCTGCGGCCGTGTCCGTATGCGCGGCGGTGC GCACCAGTGCGTCGACCTCG
Product: sulfate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MTTAPIRPDAGPQRAEHFATAQASPSRARRFALDALAGISIAGLLIPEAVAYAGLANLPPQAGLIALLSGLVVYALTGSS RFAIVSSTSSSAAVLAATVFAESGVAPAAQLALAAALVAMTGVLLILAGAARLGGMSDFVARPVLRGFTFGLALTIVLKQ LPKMLAIPVSHSDAPRVALDLVAGVPHANVASVALGAAALALLFVLGRRSRVPATLVVIVLSIVAGYVVDWHRYGIAVVG HIDLSRVAFGLPHLDRNAWTQTIELAFALMLILYAESYGSIRAFALKYGDSIAPNRDLVALGCANLVSGLLHGMPVGAGY SATSANEAAGAQTRFAGLWAAAVVALIVWLLLPQLARTPEPVLAAIVIFAVSHSLHPAVFRPYWAWHRDRLVVIAALLAV LVLGVLQGLLAAIGVSLLLTLRKLSEPNVSVLGRLRDSHDFVDIASHADARPVPGVLIVRPEAQLFFANADRMLNRVRAL LKTAPDVQTVMLSLEETPDVDGTTIESLRTFAAECAAHGLRFTIVRLKLHALHALRRAADDTLRDDALSELSVDESLQLW QAHGADGTEGTAPR
Sequences:
>Translated_574_residues MTTAPIRPDAGPQRAEHFATAQASPSRARRFALDALAGISIAGLLIPEAVAYAGLANLPPQAGLIALLSGLVVYALTGSS RFAIVSSTSSSAAVLAATVFAESGVAPAAQLALAAALVAMTGVLLILAGAARLGGMSDFVARPVLRGFTFGLALTIVLKQ LPKMLAIPVSHSDAPRVALDLVAGVPHANVASVALGAAALALLFVLGRRSRVPATLVVIVLSIVAGYVVDWHRYGIAVVG HIDLSRVAFGLPHLDRNAWTQTIELAFALMLILYAESYGSIRAFALKYGDSIAPNRDLVALGCANLVSGLLHGMPVGAGY SATSANEAAGAQTRFAGLWAAAVVALIVWLLLPQLARTPEPVLAAIVIFAVSHSLHPAVFRPYWAWHRDRLVVIAALLAV LVLGVLQGLLAAIGVSLLLTLRKLSEPNVSVLGRLRDSHDFVDIASHADARPVPGVLIVRPEAQLFFANADRMLNRVRAL LKTAPDVQTVMLSLEETPDVDGTTIESLRTFAAECAAHGLRFTIVRLKLHALHALRRAADDTLRDDALSELSVDESLQLW QAHGADGTEGTAPR >Mature_573_residues TTAPIRPDAGPQRAEHFATAQASPSRARRFALDALAGISIAGLLIPEAVAYAGLANLPPQAGLIALLSGLVVYALTGSSR FAIVSSTSSSAAVLAATVFAESGVAPAAQLALAAALVAMTGVLLILAGAARLGGMSDFVARPVLRGFTFGLALTIVLKQL PKMLAIPVSHSDAPRVALDLVAGVPHANVASVALGAAALALLFVLGRRSRVPATLVVIVLSIVAGYVVDWHRYGIAVVGH IDLSRVAFGLPHLDRNAWTQTIELAFALMLILYAESYGSIRAFALKYGDSIAPNRDLVALGCANLVSGLLHGMPVGAGYS ATSANEAAGAQTRFAGLWAAAVVALIVWLLLPQLARTPEPVLAAIVIFAVSHSLHPAVFRPYWAWHRDRLVVIAALLAVL VLGVLQGLLAAIGVSLLLTLRKLSEPNVSVLGRLRDSHDFVDIASHADARPVPGVLIVRPEAQLFFANADRMLNRVRALL KTAPDVQTVMLSLEETPDVDGTTIESLRTFAAECAAHGLRFTIVRLKLHALHALRRAADDTLRDDALSELSVDESLQLWQ AHGADGTEGTAPR
Specific function: Expression in E.coli induces sulfate uptake during early-to mid-log phase growth. Uptake is maximal at pH 6.0, is sulfate-specific, requires E.coli CysA and the transmembrane segment but not the STAS domain of the protein [H]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI94721259, Length=458, Percent_Identity=26.8558951965066, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI94721255, Length=458, Percent_Identity=26.8558951965066, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI94721253, Length=458, Percent_Identity=26.8558951965066, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI94721257, Length=458, Percent_Identity=26.8558951965066, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI39752683, Length=487, Percent_Identity=24.2299794661191, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI45827800, Length=487, Percent_Identity=24.2299794661191, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI217272867, Length=506, Percent_Identity=22.7272727272727, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI16418413, Length=506, Percent_Identity=22.7272727272727, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI47131207, Length=505, Percent_Identity=26.5346534653465, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI20336272, Length=505, Percent_Identity=26.5346534653465, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI269784651, Length=484, Percent_Identity=23.9669421487603, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI4557535, Length=509, Percent_Identity=24.950884086444, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI45827802, Length=445, Percent_Identity=23.5955056179775, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI100913030, Length=521, Percent_Identity=21.3051823416507, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI4505697, Length=485, Percent_Identity=21.4432989690722, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI20336282, Length=493, Percent_Identity=22.920892494929, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI16306483, Length=493, Percent_Identity=22.920892494929, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI262206105, Length=135, Percent_Identity=34.0740740740741, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206075, Length=135, Percent_Identity=34.0740740740741, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206069, Length=135, Percent_Identity=34.0740740740741, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI262206063, Length=135, Percent_Identity=34.0740740740741, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI65506789, Length=371, Percent_Identity=28.0323450134771, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI16418457, Length=509, Percent_Identity=21.4145383104126, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI301601599, Length=509, Percent_Identity=21.4145383104126, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87081859, Length=196, Percent_Identity=32.6530612244898, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17551690, Length=520, Percent_Identity=24.8076923076923, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI86564876, Length=531, Percent_Identity=22.2222222222222, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI86564196, Length=499, Percent_Identity=23.4468937875752, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17566848, Length=573, Percent_Identity=24.4328097731239, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI86565215, Length=503, Percent_Identity=23.4592445328032, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI193203292, Length=495, Percent_Identity=23.030303030303, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562578, Length=482, Percent_Identity=24.4813278008299, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6325260, Length=494, Percent_Identity=23.0769230769231, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323121, Length=481, Percent_Identity=21.4137214137214, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24651449, Length=446, Percent_Identity=26.9058295964126, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24649801, Length=488, Percent_Identity=24.5901639344262, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24666186, Length=406, Percent_Identity=25.615763546798, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI21358229, Length=454, Percent_Identity=25.9911894273128, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI24663084, Length=445, Percent_Identity=25.3932584269663, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI21357695, Length=445, Percent_Identity=25.3932584269663, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI19922482, Length=567, Percent_Identity=21.6931216931217, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI85815873, Length=427, Percent_Identity=24.824355971897, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI21358633, Length=574, Percent_Identity=22.9965156794425, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24647160, Length=242, Percent_Identity=21.900826446281, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355087, Length=242, Percent_Identity=21.900826446281, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 60198; Mature: 60067
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50801 STAS ; PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPIRPDAGPQRAEHFATAQASPSRARRFALDALAGISIAGLLIPEAVAYAGLANLPP CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QAGLIALLSGLVVYALTGSSRFAIVSSTSSSAAVLAATVFAESGVAPAAQLALAAALVAM CCCHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGVLLILAGAARLGGMSDFVARPVLRGFTFGLALTIVLKQLPKMLAIPVSHSDAPRVALD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH LVAGVPHANVASVALGAAALALLFVLGRRSRVPATLVVIVLSIVAGYVVDWHRYGIAVVG HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE HIDLSRVAFGLPHLDRNAWTQTIELAFALMLILYAESYGSIRAFALKYGDSIAPNRDLVA CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHH LGCANLVSGLLHGMPVGAGYSATSANEAAGAQTRFAGLWAAAVVALIVWLLLPQLARTPE HHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH PVLAAIVIFAVSHSLHPAVFRPYWAWHRDRLVVIAALLAVLVLGVLQGLLAAIGVSLLLT HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKLSEPNVSVLGRLRDSHDFVDIASHADARPVPGVLIVRPEAQLFFANADRMLNRVRAL HHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHH LKTAPDVQTVMLSLEETPDVDGTTIESLRTFAAECAAHGLRFTIVRLKLHALHALRRAAD HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DTLRDDALSELSVDESLQLWQAHGADGTEGTAPR HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTAPIRPDAGPQRAEHFATAQASPSRARRFALDALAGISIAGLLIPEAVAYAGLANLPP CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QAGLIALLSGLVVYALTGSSRFAIVSSTSSSAAVLAATVFAESGVAPAAQLALAAALVAM CCCHHHHHHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TGVLLILAGAARLGGMSDFVARPVLRGFTFGLALTIVLKQLPKMLAIPVSHSDAPRVALD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH LVAGVPHANVASVALGAAALALLFVLGRRSRVPATLVVIVLSIVAGYVVDWHRYGIAVVG HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE HIDLSRVAFGLPHLDRNAWTQTIELAFALMLILYAESYGSIRAFALKYGDSIAPNRDLVA CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHH LGCANLVSGLLHGMPVGAGYSATSANEAAGAQTRFAGLWAAAVVALIVWLLLPQLARTPE HHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH PVLAAIVIFAVSHSLHPAVFRPYWAWHRDRLVVIAALLAVLVLGVLQGLLAAIGVSLLLT HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKLSEPNVSVLGRLRDSHDFVDIASHADARPVPGVLIVRPEAQLFFANADRMLNRVRAL HHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHH LKTAPDVQTVMLSLEETPDVDGTTIESLRTFAAECAAHGLRFTIVRLKLHALHALRRAAD HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH DTLRDDALSELSVDESLQLWQAHGADGTEGTAPR HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]