| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is ychM [C]
Identifier: 161524878
GI number: 161524878
Start: 1881044
End: 1882789
Strand: Reverse
Name: ychM [C]
Synonym: Bmul_1705
Alternate gene names: 161524878
Gene position: 1882789-1881044 (Counterclockwise)
Preceding gene: 161524880
Following gene: 161524875
Centisome position: 54.6
GC content: 68.21
Gene sequence:
>1746_bases GTGGCTAAGGTCGGCATCGTACGGCTAGGCAGCGACATCGCGCGCTACGTGCCCGGTATCGCATGGATCCGCACGTACCG GATCGCGTGGCTACCGGGCGACGCAATCGCGGGCGCGGCCCTCAGCGCCGTCTTGGTGCCGGCCGGCATGGCCTACGCGA TCGCGTCCGGGCTTTCCGCCGCGTCGGGACTCTATGCGTCGATTGCCGCACTGGTCGCCTACGCCGTGTTCGGGCCGAGC CGCGTCCTCGTGCTCGGGCCCGATTCCGCGCTGATTGCATTGATCGCGGCGAGCGTCGTGCCGCTCGCGCACGGCAATGC CGCGCATGCCGCCGCGCTCGCAGGCGCGCTGGCGCTGCTCTCCGGCACGCTCTGTCTGGCCGTCGGCCTGTTCCGGCTCG GCTTCGTCACCGATCTGCTCTCCATGCCGATCCGCTACGGCTATCTGAACGGTATCGTCGTCACGATCATCGTCAGCCAG CTGCCGAAGCTGCTCGGCCTGAAGGTGCACGAAGCGGCGATTCCGCAGCAACTGCGCGAGCTGGCAACGGCCGTCGCTGC CGGAAAAACGAATCTCGCGGCCTTGTCGATCGGCGTCCTGTCGCTTGCCGTGATCCTCGCGTTCAAACGCTGGATGCCGA AAATGCCGGGCGTGCTGGTTGCCGTGGTCGTCGCGACCGTCGCGGCTGCCTATTTCGATTTGGCGGCGCGGGCCGGTGTC GGCGTGGTAGGCACCTTGCCGCGCGGGCTGCCGGTGCCCGAATTTCCGGCGCTGGCGGCGAAGGAATGGCTTGCACTACC GGCAAGTGCCGCCGCCATCGCGCTGGTGTCGTTGACGGACCTCAGCATGCTGTCGCAGATATACGGGCTGCGCAGCGGGC AGGGCGTCGACCGCAATCGCGAATGCGTGGCGCTCGGCGTCGCGAATGTCGCGGCCGGTCTGTTCCAGGGCTTTGCGGTC GCGGCCAGCGGATCGCGCACGCCCGTCGCGGAGGACGCGGGCGCGAAGAGTCAGGCGTGCGGCCTGATTGCCGCACTCAT CGTCGCGGCGTTGCTGCTTTCCGTCCCGCAGGCGTTGCGCGATACGCCGCAAGCCACGCTCGGCGCCGTGGTCGTCGCCG CGTCGCTGTCGTTGATCGAAATCACGGGGCTGCGGCGGCTTTACCGGCTGCGTCGTCCGGAATTCGTGCAGTCGCTCGCG TGCTTTGTCGGCGTCGTAGTGTGGGGTGTCGTGACCGGCGTGGGGATCGCACTCGGGCTGGCCGTGCTGGCGTTCCTGTG GCGCGCGTGGCGCCCTTACTCAGCGGTGCTCGGCCGGCGCGACGGCGTGAAGGGCTATCACGACATCGCGCGGCATCCGG ACGCGCGGCGCGTCCCCGGGCTGGTTCTGCTGCGCTGGGATGCGCCGTTGTTCTTCGCGAATGCGGAAATCTTTCACGAA CGCGTGTTGACGGCGGCGCGCGAGGCGCCCACGCGCACGCGGTGGGTTGCGATCGCGGCCGAGCCGGTGACGGATATCGA CGTCACCGCAGCCGACATGCTCGCGAGGCTCGACGACGAACTCCACGATGCGGACGTGCAGCTCTGCTTCGCCGAGCTCA AGGGGCCCGTCAAGGACAGCCTGAAGCGATATGGGTTGTACGAGCGAATCGGCGAAGACCACTTCCTGCCGACGCTCGGC GAAACGGTGTCGGCGTATCTGAAATCGCATCCGGTGGACTGGCACGATTGGGAAGGCGGAGGGTGA
Upstream 100 bases:
>100_bases GGACTTGCTGCGCAGGGACGTCCGGAATGACCGCTCGCCGCCATGGAACCACGAGATCCGAAAGCCCACGACCGTGCCGC GTTCCTCGGGAGCAAGACGT
Downstream 100 bases:
>100_bases GTGATCGCAACCGGACGGCGGCGACGCGTTGCTGGCAGCGTAGCATCATGCGTCGCGTCGATAGTGGACGACTGCGCCGG TGTTCGGCGCGACGGGATTG
Product: sulfate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MAKVGIVRLGSDIARYVPGIAWIRTYRIAWLPGDAIAGAALSAVLVPAGMAYAIASGLSAASGLYASIAALVAYAVFGPS RVLVLGPDSALIALIAASVVPLAHGNAAHAAALAGALALLSGTLCLAVGLFRLGFVTDLLSMPIRYGYLNGIVVTIIVSQ LPKLLGLKVHEAAIPQQLRELATAVAAGKTNLAALSIGVLSLAVILAFKRWMPKMPGVLVAVVVATVAAAYFDLAARAGV GVVGTLPRGLPVPEFPALAAKEWLALPASAAAIALVSLTDLSMLSQIYGLRSGQGVDRNRECVALGVANVAAGLFQGFAV AASGSRTPVAEDAGAKSQACGLIAALIVAALLLSVPQALRDTPQATLGAVVVAASLSLIEITGLRRLYRLRRPEFVQSLA CFVGVVVWGVVTGVGIALGLAVLAFLWRAWRPYSAVLGRRDGVKGYHDIARHPDARRVPGLVLLRWDAPLFFANAEIFHE RVLTAAREAPTRTRWVAIAAEPVTDIDVTAADMLARLDDELHDADVQLCFAELKGPVKDSLKRYGLYERIGEDHFLPTLG ETVSAYLKSHPVDWHDWEGGG
Sequences:
>Translated_581_residues MAKVGIVRLGSDIARYVPGIAWIRTYRIAWLPGDAIAGAALSAVLVPAGMAYAIASGLSAASGLYASIAALVAYAVFGPS RVLVLGPDSALIALIAASVVPLAHGNAAHAAALAGALALLSGTLCLAVGLFRLGFVTDLLSMPIRYGYLNGIVVTIIVSQ LPKLLGLKVHEAAIPQQLRELATAVAAGKTNLAALSIGVLSLAVILAFKRWMPKMPGVLVAVVVATVAAAYFDLAARAGV GVVGTLPRGLPVPEFPALAAKEWLALPASAAAIALVSLTDLSMLSQIYGLRSGQGVDRNRECVALGVANVAAGLFQGFAV AASGSRTPVAEDAGAKSQACGLIAALIVAALLLSVPQALRDTPQATLGAVVVAASLSLIEITGLRRLYRLRRPEFVQSLA CFVGVVVWGVVTGVGIALGLAVLAFLWRAWRPYSAVLGRRDGVKGYHDIARHPDARRVPGLVLLRWDAPLFFANAEIFHE RVLTAAREAPTRTRWVAIAAEPVTDIDVTAADMLARLDDELHDADVQLCFAELKGPVKDSLKRYGLYERIGEDHFLPTLG ETVSAYLKSHPVDWHDWEGGG >Mature_580_residues AKVGIVRLGSDIARYVPGIAWIRTYRIAWLPGDAIAGAALSAVLVPAGMAYAIASGLSAASGLYASIAALVAYAVFGPSR VLVLGPDSALIALIAASVVPLAHGNAAHAAALAGALALLSGTLCLAVGLFRLGFVTDLLSMPIRYGYLNGIVVTIIVSQL PKLLGLKVHEAAIPQQLRELATAVAAGKTNLAALSIGVLSLAVILAFKRWMPKMPGVLVAVVVATVAAAYFDLAARAGVG VVGTLPRGLPVPEFPALAAKEWLALPASAAAIALVSLTDLSMLSQIYGLRSGQGVDRNRECVALGVANVAAGLFQGFAVA ASGSRTPVAEDAGAKSQACGLIAALIVAALLLSVPQALRDTPQATLGAVVVAASLSLIEITGLRRLYRLRRPEFVQSLAC FVGVVVWGVVTGVGIALGLAVLAFLWRAWRPYSAVLGRRDGVKGYHDIARHPDARRVPGLVLLRWDAPLFFANAEIFHER VLTAAREAPTRTRWVAIAAEPVTDIDVTAADMLARLDDELHDADVQLCFAELKGPVKDSLKRYGLYERIGEDHFLPTLGE TVSAYLKSHPVDWHDWEGGG
Specific function: Expression in E.coli induces sulfate uptake during early-to mid-log phase growth. Uptake is maximal at pH 6.0, is sulfate-specific, requires E.coli CysA and the transmembrane segment but not the STAS domain of the protein [H]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI45827800, Length=579, Percent_Identity=26.2521588946459, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI39752683, Length=579, Percent_Identity=26.2521588946459, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI94721259, Length=489, Percent_Identity=28.6298568507157, Blast_Score=182, Evalue=9e-46, Organism=Homo sapiens, GI94721257, Length=489, Percent_Identity=28.6298568507157, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI94721255, Length=489, Percent_Identity=28.6298568507157, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI94721253, Length=489, Percent_Identity=28.6298568507157, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI269784651, Length=578, Percent_Identity=26.2975778546713, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI4557535, Length=510, Percent_Identity=27.0588235294118, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI4505697, Length=501, Percent_Identity=26.9461077844311, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI45827802, Length=463, Percent_Identity=27.8617710583153, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI16418413, Length=517, Percent_Identity=25.1450676982592, Blast_Score=147, Evalue=4e-35, Organism=Homo sapiens, GI217272867, Length=517, Percent_Identity=25.1450676982592, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI47131207, Length=510, Percent_Identity=27.843137254902, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI20336272, Length=510, Percent_Identity=27.843137254902, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI262206105, Length=560, Percent_Identity=26.4285714285714, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI262206075, Length=560, Percent_Identity=26.4285714285714, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI262206069, Length=560, Percent_Identity=26.4285714285714, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI262206063, Length=560, Percent_Identity=26.4285714285714, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI100913030, Length=509, Percent_Identity=24.1650294695481, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI20336282, Length=544, Percent_Identity=22.4264705882353, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI16306483, Length=543, Percent_Identity=22.0994475138122, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI16418457, Length=549, Percent_Identity=20.2185792349727, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI301601599, Length=549, Percent_Identity=20.2185792349727, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI65506789, Length=544, Percent_Identity=25.5514705882353, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI45827804, Length=270, Percent_Identity=26.6666666666667, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI87081859, Length=566, Percent_Identity=24.2049469964664, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17551690, Length=625, Percent_Identity=26.08, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17566848, Length=544, Percent_Identity=27.5735294117647, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI86564196, Length=623, Percent_Identity=23.916532905297, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI86565215, Length=579, Percent_Identity=23.6614853195164, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17562578, Length=631, Percent_Identity=23.9302694136292, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI86564876, Length=576, Percent_Identity=24.3055555555556, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193203292, Length=556, Percent_Identity=23.7410071942446, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI86565213, Length=268, Percent_Identity=27.9850746268657, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI86565209, Length=241, Percent_Identity=26.5560165975104, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI86565211, Length=241, Percent_Identity=26.5560165975104, Blast_Score=82, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6325260, Length=562, Percent_Identity=19.7508896797153, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323121, Length=468, Percent_Identity=24.7863247863248, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6319771, Length=480, Percent_Identity=24.1666666666667, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI24666186, Length=538, Percent_Identity=24.3494423791822, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI21358633, Length=539, Percent_Identity=24.4897959183673, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24649801, Length=560, Percent_Identity=24.2857142857143, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI19922482, Length=534, Percent_Identity=22.4719101123595, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24651449, Length=566, Percent_Identity=21.5547703180212, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI85815873, Length=542, Percent_Identity=22.8782287822878, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24663084, Length=557, Percent_Identity=24.4165170556553, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357695, Length=557, Percent_Identity=24.4165170556553, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI21358229, Length=581, Percent_Identity=21.8588640275387, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24647160, Length=158, Percent_Identity=28.4810126582279, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355087, Length=158, Percent_Identity=28.4810126582279, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 60748; Mature: 60617
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVGIVRLGSDIARYVPGIAWIRTYRIAWLPGDAIAGAALSAVLVPAGMAYAIASGLSA CCCCEEEECCHHHHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGLYASIAALVAYAVFGPSRVLVLGPDSALIALIAASVVPLAHGNAAHAAALAGALALL HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SGTLCLAVGLFRLGFVTDLLSMPIRYGYLNGIVVTIIVSQLPKLLGLKVHEAAIPQQLRE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LATAVAAGKTNLAALSIGVLSLAVILAFKRWMPKMPGVLVAVVVATVAAAYFDLAARAGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVVGTLPRGLPVPEFPALAAKEWLALPASAAAIALVSLTDLSMLSQIYGLRSGQGVDRNR CEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ECVALGVANVAAGLFQGFAVAASGSRTPVAEDAGAKSQACGLIAALIVAALLLSVPQALR CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DTPQATLGAVVVAASLSLIEITGLRRLYRLRRPEFVQSLACFVGVVVWGVVTGVGIALGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLAFLWRAWRPYSAVLGRRDGVKGYHDIARHPDARRVPGLVLLRWDAPLFFANAEIFHE HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEHHHHHHHH RVLTAAREAPTRTRWVAIAAEPVTDIDVTAADMLARLDDELHDADVQLCFAELKGPVKDS HHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKRYGLYERIGEDHFLPTLGETVSAYLKSHPVDWHDWEGGG HHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKVGIVRLGSDIARYVPGIAWIRTYRIAWLPGDAIAGAALSAVLVPAGMAYAIASGLSA CCCEEEECCHHHHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGLYASIAALVAYAVFGPSRVLVLGPDSALIALIAASVVPLAHGNAAHAAALAGALALL HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH SGTLCLAVGLFRLGFVTDLLSMPIRYGYLNGIVVTIIVSQLPKLLGLKVHEAAIPQQLRE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LATAVAAGKTNLAALSIGVLSLAVILAFKRWMPKMPGVLVAVVVATVAAAYFDLAARAGV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVVGTLPRGLPVPEFPALAAKEWLALPASAAAIALVSLTDLSMLSQIYGLRSGQGVDRNR CEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ECVALGVANVAAGLFQGFAVAASGSRTPVAEDAGAKSQACGLIAALIVAALLLSVPQALR CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DTPQATLGAVVVAASLSLIEITGLRRLYRLRRPEFVQSLACFVGVVVWGVVTGVGIALGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLAFLWRAWRPYSAVLGRRDGVKGYHDIARHPDARRVPGLVLLRWDAPLFFANAEIFHE HHHHHHHHCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCEEEHHHHHHHH RVLTAAREAPTRTRWVAIAAEPVTDIDVTAADMLARLDDELHDADVQLCFAELKGPVKDS HHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LKRYGLYERIGEDHFLPTLGETVSAYLKSHPVDWHDWEGGG HHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]