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The map label for this gene is rbsC [H]

Identifier: 161524802

GI number: 161524802

Start: 1804910

End: 1805929

Strand: Reverse

Name: rbsC [H]

Synonym: Bmul_1629

Alternate gene names: 161524802

Gene position: 1805929-1804910 (Counterclockwise)

Preceding gene: 161524803

Following gene: 161524801

Centisome position: 52.37

GC content: 68.63

Gene sequence:

>1020_bases
ATGACCCAGCCCCCCGTCACCCCGACCGATGCCGGCGCCGCGCAGACCGTGACCGGCCGCCGCGCGCGCACGCTGTCCGG
CACGCGGCTCGGCGTGTCGAACTATCTCGGCCTCGCCGGCGCGCTGATCGCGATGATCGCGCTGTTTTCGGCGCTGAGCT
CGCATTTCCTGACCTACGATACGTTCAGCACGATCGCGAACCAGATTCCCGACCTCGTCGTGATGTCGGTCGGGATGACG
TTCGTGCTGATCATCGCGGGGATCGACCTGTCGGTCGGCTCGGTGCTCGCGCTTGCCGCGTCGATGGTCAGCGTCGCCGC
GCTGAAGTGGCAGTGGGGGCCGCTGCCGGCCGCGCTGATCGGCATCGCGGTCGCGACCGCGACGGGCTCGCTGACGGGCG
CCGTCACGGTCGGCTGGCGGATTCCGTCGTTCATCGTGTCGCTCGGCGTGCTCGAGGCCGCGCGCGGCCTCGCGTACCAG
CTGACCAATTCGCGCACGGCGTATATCGGAGACGCGTTCGATTTCCTGTCGAATCCGATCGCGCTCGGCATCTCGCCGGC
GTTCCTGATCGCCGTCGCGGTGATGATTGCCGCGCAGTTCGTGCTGACGCGCACGGTGTTCGGCCGCTATCTGGTGGGGA
TCGGCACGAACGAGGAGGCCGTGCGGCTTGCCGGGGTTAACCCGCGGCCGTATAAAATCCTTGTCTTCGCGCTGATGGGC
GCGCTCGCCGGGCTCGCGTCGCTGTTCCAGATTTCGCGCCTCGAGGCCGCCGATCCGAACGCGGGCGCCGGGCTCGAGCT
GCAGGTGATCGCGGCCGTCGTGATCGGCGGCACGAGCCTGATGGGCGGCCGCGGCTCGGTGATCAGCACGTTTTTCGGCG
TATTGATCATCTCGGTGCTCGCTGCGGGCCTGGCGCAGATCGGCGCGAACGAGCCGACGAAACGGATCATCACCGGGGCG
GTGATCGTGGTCGCGGTCGTGCTCGACACGTATCGCAGCCGGCGCACGCGCACGCGGTAA

Upstream 100 bases:

>100_bases
CCGCGGCGTTCGCGGGCTTCGGCCGCGACGCGATGCCGCACGGCGCACCGCCGCCGGACGCGCATGCCGCGCACGGCACT
TCGACGACAGGACGACCGCA

Downstream 100 bases:

>100_bases
GACCAACAACAGAAAGAGCAGAGAGAAACGGGAAATGGCGACGATCAAGGATGTGGCGGCCATGGCGGGCGTGTCGTTTA
CGACGGTATCGCACGTGGTG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTQPPVTPTDAGAAQTVTGRRARTLSGTRLGVSNYLGLAGALIAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMT
FVLIIAGIDLSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAVTVGWRIPSFIVSLGVLEAARGLAYQ
LTNSRTAYIGDAFDFLSNPIALGISPAFLIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMG
ALAGLASLFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRIITGA
VIVVAVVLDTYRSRRTRTR

Sequences:

>Translated_339_residues
MTQPPVTPTDAGAAQTVTGRRARTLSGTRLGVSNYLGLAGALIAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMT
FVLIIAGIDLSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAVTVGWRIPSFIVSLGVLEAARGLAYQ
LTNSRTAYIGDAFDFLSNPIALGISPAFLIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMG
ALAGLASLFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRIITGA
VIVVAVVLDTYRSRRTRTR
>Mature_338_residues
TQPPVTPTDAGAAQTVTGRRARTLSGTRLGVSNYLGLAGALIAMIALFSALSSHFLTYDTFSTIANQIPDLVVMSVGMTF
VLIIAGIDLSVGSVLALAASMVSVAALKWQWGPLPAALIGIAVATATGSLTGAVTVGWRIPSFIVSLGVLEAARGLAYQL
TNSRTAYIGDAFDFLSNPIALGISPAFLIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMGA
LAGLASLFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGANEPTKRIITGAV
IVVAVVLDTYRSRRTRTR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=337, Percent_Identity=35.6083086053413, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=31.3915857605178, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1790524, Length=294, Percent_Identity=32.312925170068, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI145693152, Length=311, Percent_Identity=29.903536977492, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082395, Length=251, Percent_Identity=33.4661354581673, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=43.0656934306569, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI145693214, Length=251, Percent_Identity=31.8725099601594, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787793, Length=286, Percent_Identity=27.6223776223776, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788471, Length=288, Percent_Identity=29.8611111111111, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787794, Length=312, Percent_Identity=24.6794871794872, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34949; Mature: 34817

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPPVTPTDAGAAQTVTGRRARTLSGTRLGVSNYLGLAGALIAMIALFSALSSHFLTYD
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALAASMVSVAALKWQWGPLPAALI
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GIAVATATGSLTGAVTVGWRIPSFIVSLGVLEAARGLAYQLTNSRTAYIGDAFDFLSNPI
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHCCCC
ALGISPAFLIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMG
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHHHHHHH
ALAGLASLFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAGLAQIGANEPTKRIITGAVIVVAVVLDTYRSRRTRTR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQPPVTPTDAGAAQTVTGRRARTLSGTRLGVSNYLGLAGALIAMIALFSALSSHFLTYD
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFSTIANQIPDLVVMSVGMTFVLIIAGIDLSVGSVLALAASMVSVAALKWQWGPLPAALI
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GIAVATATGSLTGAVTVGWRIPSFIVSLGVLEAARGLAYQLTNSRTAYIGDAFDFLSNPI
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHCCCC
ALGISPAFLIAVAVMIAAQFVLTRTVFGRYLVGIGTNEEAVRLAGVNPRPYKILVFALMG
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCHHHHHHHHHH
ALAGLASLFQISRLEAADPNAGAGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AAGLAQIGANEPTKRIITGAVIVVAVVLDTYRSRRTRTR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]