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The map label for this gene is cbiD [H]

Identifier: 161524739

GI number: 161524739

Start: 1716106

End: 1717194

Strand: Reverse

Name: cbiD [H]

Synonym: Bmul_1566

Alternate gene names: 161524739

Gene position: 1717194-1716106 (Counterclockwise)

Preceding gene: 161524740

Following gene: 161524738

Centisome position: 49.8

GC content: 71.26

Gene sequence:

>1089_bases
ATGCGCGACGAGACGCCCGAACGGCCCGCGCCGCTGCGCTTCGGCTATACGACCGGCAGCTGTGCGACCGCGACGTCGCT
CGCGGCGGCGCGCCTGCTGCTCACAGGTCGCGCGGACGACGCGGTCGAAATCGTCTTGCCGAAAGGGCAGCGCGTGATGA
TGCGCCTCGAATTCTGCCGCGCGACGGCCGACGGCGCGGAAGCCGGCACGATCAAGGACGCCGGGGACGATCCCGACGTC
ACGCACGGCGCACTGATCTTCGCGCGCGTCGCGCTCGGCGGCGCACGCGGCGTGCGTTTTCATGCGGGGCCGGGCGTCGG
CACGGTCACGCGCGCGGGCCTCGCGCTGCCGATCGGCGAACCGGCGATCAATCCGGTGCCGCGCCAGATGATGACGACGC
ATCTCGACGCGCTCGCGGCCGAACAGGGCTACACGGGCGGCTTCGACGTGACGATCGGCGTCGAAGGCGGCGAGGCACTC
GCGCTGAAGACGATGAATCCGCGTCTCGGCATCGTGGGCGGGTTGTCGATTCTCGGCACGACCGGCATCGTGCGGCCGTT
CTCGTGTTCCGCGTACATCGCGTCGATCCATCAGGGGATCGACGTCGCGCGCGCCAACGGCGTCGCGCATATCGCCGCGT
GCACCGGCAATGCGAGCGAGGACGCGATGCGCGCGCACTACGGGCTGCCCGACATCGCGCTGATCGAGATGGGCGATTTC
GCGGGCGCGGTGCTCAAGCATCTGCGGCGCGCGCCGGTCGCGCGGCTCTCGATGTGCGGCGGCTTCGGCAAGCTGAGCAA
GCTCGCGGCCGGCCATCTCGATCTGCACAGCCGCCATTCGAGCATCGACTTGCCGCTGCTTGCGCAGTGGGCGCGCGACG
CGGGCGCGAGCGACGCGTTGCAGGCCGCGATCCGGGCGGCCAATACGAGCGTCGAAGCGCTGGCGCTCGCCGGCGCGGAC
GGCGTGCCGCTCGGCGATGTCGTCTGTGCGCATGCGCTGCGCGTCGCGCGCGACATCGTGCCCGCGTCGGTCGCCGTCGA
GATGTTCGCGATCGACCGGCAGGGCCGTTTCGTCGGGAGCGCACGATGA

Upstream 100 bases:

>100_bases
TCGGCCGCTTCGACACCTGGCGACAGGCGCTGCCCGTCACGCTGTACGACGTGCGCAAACCCGATACGACCGCCGCGCCG
TGCGCCGCGGAGTGCCGCTG

Downstream 100 bases:

>100_bases
GCGCGCGCATCCTGCTGCTCGGCGGCACCGGCGACGCACTGACGATCGCGCGCGCGCTCGGCCCACAGCACGTCTACAGC
CTCGCGGGGCTCGGCAAGGT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRDETPERPAPLRFGYTTGSCATATSLAAARLLLTGRADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALGGARGVRFHAGPGVGTVTRAGLALPIGEPAINPVPRQMMTTHLDALAAEQGYTGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVAHIAACTGNASEDAMRAHYGLPDIALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWARDAGASDALQAAIRAANTSVEALALAGAD
GVPLGDVVCAHALRVARDIVPASVAVEMFAIDRQGRFVGSAR

Sequences:

>Translated_362_residues
MRDETPERPAPLRFGYTTGSCATATSLAAARLLLTGRADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALGGARGVRFHAGPGVGTVTRAGLALPIGEPAINPVPRQMMTTHLDALAAEQGYTGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVAHIAACTGNASEDAMRAHYGLPDIALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWARDAGASDALQAAIRAANTSVEALALAGAD
GVPLGDVVCAHALRVARDIVPASVAVEMFAIDRQGRFVGSAR
>Mature_362_residues
MRDETPERPAPLRFGYTTGSCATATSLAAARLLLTGRADDAVEIVLPKGQRVMMRLEFCRATADGAEAGTIKDAGDDPDV
THGALIFARVALGGARGVRFHAGPGVGTVTRAGLALPIGEPAINPVPRQMMTTHLDALAAEQGYTGGFDVTIGVEGGEAL
ALKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVAHIAACTGNASEDAMRAHYGLPDIALIEMGDF
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWARDAGASDALQAAIRAANTSVEALALAGAD
GVPLGDVVCAHALRVARDIVPASVAVEMFAIDRQGRFVGSAR

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37274; Mature: 37274

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDETPERPAPLRFGYTTGSCATATSLAAARLLLTGRADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHH
ATADGAEAGTIKDAGDDPDVTHGALIFARVALGGARGVRFHAGPGVGTVTRAGLALPIGE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCEEEECCC
PAINPVPRQMMTTHLDALAAEQGYTGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGVAHIAACTGNASEDAMRAHYGLPDIALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWARDAGASDAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHH
QAAIRAANTSVEALALAGADGVPLGDVVCAHALRVARDIVPASVAVEMFAIDRQGRFVGS
HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEECC
AR
CC
>Mature Secondary Structure
MRDETPERPAPLRFGYTTGSCATATSLAAARLLLTGRADDAVEIVLPKGQRVMMRLEFCR
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHH
ATADGAEAGTIKDAGDDPDVTHGALIFARVALGGARGVRFHAGPGVGTVTRAGLALPIGE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCEEEECCC
PAINPVPRQMMTTHLDALAAEQGYTGGFDVTIGVEGGEALALKTMNPRLGIVGGLSILGT
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECHHHHCC
TGIVRPFSCSAYIASIHQGIDVARANGVAHIAACTGNASEDAMRAHYGLPDIALIEMGDF
CCCCCCCCHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEECHH
AGAVLKHLRRAPVARLSMCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAQWARDAGASDAL
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHH
QAAIRAANTSVEALALAGADGVPLGDVVCAHALRVARDIVPASVAVEMFAIDRQGRFVGS
HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEECC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA