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The map label for this gene is arpC [H]

Identifier: 161524691

GI number: 161524691

Start: 1671491

End: 1673038

Strand: Reverse

Name: arpC [H]

Synonym: Bmul_1518

Alternate gene names: 161524691

Gene position: 1673038-1671491 (Counterclockwise)

Preceding gene: 161524692

Following gene: 161524690

Centisome position: 48.52

GC content: 73.97

Gene sequence:

>1548_bases
ATGGAATCGTCGATGAACCTGAAAACGAAAGTCGTGCGCGCGCTCGCCGTCGCGAGCGTCGTCGGCCCGCTCGCCGGCTG
CAGCGCGTTCGCGCCGAGCGGCGCGCCGCCCGCGATGCCGTCGCCCGCGCATTACGGCGCGGCGCCGCAGCCGCAGCAGA
CCGTTGCCGCACAAGGCGTCGCGCAGCAGTTCGAAGTCGGCGCGCAGCCGGTGTCCGACTGGTGGACGCAATACCGTTCC
GACGCACTGAACGCGCTCGTCGACGAAGGGCTGCGCAACAGCCCGACGCTCGCGGCCGCGTCGCACTCGCTCGATGCCGC
GCGCGAGCAGCTGCGCGCGCAGATCGGCAGTTCGCTGCTGCCGTCGATCGATGCGGGCGGCCAGGCGGCGCGTCAGCGCG
CGCTCGGCGTGCCGATTCGCGCGCTCGGCGCGCCGACGCTGCTGTACGACACGTTCGTCGGACAGCTGCAGGCGAGCTAC
ACGATCGACCTGTTCGGCGCCGCGCGCTTTGCGAACCGGTCGCTCGCGAATCGCGTGGACGTCAGCGCGTTCCAGCTCGA
GTCCGCGCGGCGTGCGCTGGCCGCGAACATCGTGACCGCGGCGATCACCGTGTCGGTGCTCGACGCGCAGATCGACACGA
CCGAACGGCTCGTCGCACTCGCGAACGATCAGGCGCGCGACGCCGAGCGCCGCCATGCGCTCGGCGCAGCGGCGCGCAGC
GATGCGCTGAGCGCGCGGCAAAGCGCGGACACGTTCGCCGCGAGCCTGCCTGCGCTGCGCCAGCAGCGCGATAGCGCGCG
CCATGCGCTCGCGGTGCTGGTCGGCCGTACGCCGGACCGGCCGCCCGCCGGGATCGCCCTCGCCGATCTGCATCTGCCCG
AACAGGTGCCCGTCGTCGTGCCGTCCGACCTGCTGCAAAGCCGCCCCGACATCCGCGCCGCCGACGCGGCGCTGAAGGCC
GCCGCGGCCGAAGTCGGCGTCGCGACCGCGCAGCTGTTCCCGCAGCTGTCGCTGTCGGCCTCGATGGGCAAAGGCGGCTT
CGACTGGCCGACGATGCTGTCGGGCGCCGGCGCGATCTGGAGCGTCGGCGCGTCGCTGACGCAGCCGCTGTTCCACGGCG
GCGCGTTGCTCGCGCAACGCCGCGCCGCGAAGGCGACGTACGAAGCCGCCGTCGACCAGTATCGGCAGACCGTGCTCGCC
GCGTTCCAGAACGTCGCCGATTCGCTCGCGGCGCTCGAACACGATGCCCAAGCGCTCGACGCGTCGTCGCAGGCGGCGCT
CGCCGCGCGCGGCGCATCGGACGACGCCGCGGCACGCGTGCGGCTCGGCGCGCTGCCGCCGTCGGCCGCGCGCGCGAGCG
AACTGCAATACCGCAACGCGCAGCTCGACGCGATTCGCGCGACCGGGGCGCGCCTCGCGGATACCGCGCGCCTCTACCAG
GCGATGGGCACGCCGCCGACCGAGCGCGTCGACACGGTCGCGACCGATCGGCTTGCGCGCGACGCGGCGGCGGCATCAGG
GCCGCCGTCGTCGCCGGCGTCGCCGTAG

Upstream 100 bases:

>100_bases
TCTACCTGCCCGCGCTGTACGCGACCTGGTTCCGCGTGAAGCGCGACGAGCGCGACCCGCAGGACGGCCCGCCGCATGGC
GCGCCGTCGGGAGCCTGACC

Downstream 100 bases:

>100_bases
CCGCGCCGCGCGCGCTCGCGCGATGCGCGAGCGCCTTGCAACTTCCGCTTGACCCTCACGTAGCGTAACGTTCGAGACTC
CAGTGTGCGCACCGAACGGA

Product: RND efflux system outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MESSMNLKTKVVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGVAQQFEVGAQPVSDWWTQYRS
DALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLLPSIDAGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASY
TIDLFGAARFANRSLANRVDVSAFQLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARS
DALSARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALADLHLPEQVPVVVPSDLLQSRPDIRAADAALKA
AAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIWSVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLA
AFQNVADSLAALEHDAQALDASSQAALAARGASDDAAARVRLGALPPSAARASELQYRNAQLDAIRATGARLADTARLYQ
AMGTPPTERVDTVATDRLARDAAAASGPPSSPASP

Sequences:

>Translated_515_residues
MESSMNLKTKVVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGVAQQFEVGAQPVSDWWTQYRS
DALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLLPSIDAGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASY
TIDLFGAARFANRSLANRVDVSAFQLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARS
DALSARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALADLHLPEQVPVVVPSDLLQSRPDIRAADAALKA
AAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIWSVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLA
AFQNVADSLAALEHDAQALDASSQAALAARGASDDAAARVRLGALPPSAARASELQYRNAQLDAIRATGARLADTARLYQ
AMGTPPTERVDTVATDRLARDAAAASGPPSSPASP
>Mature_515_residues
MESSMNLKTKVVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGVAQQFEVGAQPVSDWWTQYRS
DALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLLPSIDAGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASY
TIDLFGAARFANRSLANRVDVSAFQLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARS
DALSARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALADLHLPEQVPVVVPSDLLQSRPDIRAADAALKA
AAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIWSVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLA
AFQNVADSLAALEHDAQALDASSQAALAARGASDDAAARVRLGALPPSAARASELQYRNAQLDAIRATGARLADTARLYQ
AMGTPPTERVDTVATDRLARDAAAASGPPSSPASP

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=396, Percent_Identity=26.5151515151515, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI2367348, Length=413, Percent_Identity=22.7602905569007, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53187; Mature: 53187

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSMNLKTKVVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGV
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQFEVGAQPVSDWWTQYRSDALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PSIDAGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASYTIDLFGAARFANRSLANRVD
CCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHC
VSAFQLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DALSARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALADLHLPEQVPVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEC
PSDLLQSRPDIRAADAALKAAAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIW
CHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
SVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLAAFQNVADSLAALEHDAQALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASSQAALAARGASDDAAARVRLGALPPSAARASELQYRNAQLDAIRATGARLADTARLYQ
CCCHHHHHHCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
AMGTPPTERVDTVATDRLARDAAAASGPPSSPASP
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MESSMNLKTKVVRALAVASVVGPLAGCSAFAPSGAPPAMPSPAHYGAAPQPQQTVAAQGV
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AQQFEVGAQPVSDWWTQYRSDALNALVDEGLRNSPTLAAASHSLDAAREQLRAQIGSSLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PSIDAGGQAARQRALGVPIRALGAPTLLYDTFVGQLQASYTIDLFGAARFANRSLANRVD
CCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHC
VSAFQLESARRALAANIVTAAITVSVLDAQIDTTERLVALANDQARDAERRHALGAAARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DALSARQSADTFAASLPALRQQRDSARHALAVLVGRTPDRPPAGIALADLHLPEQVPVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEC
PSDLLQSRPDIRAADAALKAAAAEVGVATAQLFPQLSLSASMGKGGFDWPTMLSGAGAIW
CHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
SVGASLTQPLFHGGALLAQRRAAKATYEAAVDQYRQTVLAAFQNVADSLAALEHDAQALD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASSQAALAARGASDDAAARVRLGALPPSAARASELQYRNAQLDAIRATGARLADTARLYQ
CCCHHHHHHCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHH
AMGTPPTERVDTVATDRLARDAAAASGPPSSPASP
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]