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The map label for this gene is tex [H]

Identifier: 161524649

GI number: 161524649

Start: 1624607

End: 1627045

Strand: Reverse

Name: tex [H]

Synonym: Bmul_1476

Alternate gene names: 161524649

Gene position: 1627045-1624607 (Counterclockwise)

Preceding gene: 161524653

Following gene: 161524632

Centisome position: 47.18

GC content: 68.06

Gene sequence:

>2439_bases
ATGCCCCGCTTCACTCACCCGCGGCATCTGGTCCGGCGGGCCCGCCATGCAGCCCGCCGCGCCGGGCATGCCGGCCCGCG
CCGCGATTTCAGCAGGCAGAAGCTCATCAACGACATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCACCG
AACTGTCCGTCCAGCCGCGCCAGGTCGCGGCCGCGGTGCAACTTCTCGACGAAGGCTCGACCGTTCCGTTCATTGCCCGG
TATCGGAAGGAAGTGACCGGCAACCTGGACGACACGCAACTGCGCCAGCTCGAAGAGCGCCTCCTCTATCTGCGCGAACT
CGAGGATCGCCGCGCGGCGATCCTGTCGAGCATCGAGGAACAGGGCAAGCTGACCGACGAACTGCGTGCGGCAATCGATG
CGGCCGACAGCAAACAGGTGCTCGAAGACCTTTATCTGCCGTACAAGCCGAAGCGCCGCACGCGCGCCCAGATCGCGCGC
GAAGCGGGTCTCGAGCCGCTCGCGCAGGCGCTGCTCGCCAATCCGATGCTCGATCCGCACACCGAGGCGGCCGCGTACGT
CGATGCCGACAAGGGCGTCGCCGACGTGAAGGCCGCGCTCGACGGCGCGCGCGACATCCTGTCCGAACAGTTCGGCGAGA
CGGCCGAGCTGCTCGGCAAGCTGCGCGACTATCTGCACGATCGCGGCGTCGTGTCGTCGGCGGTCGTCGAGGGCAAGGAA
AACGAAGAAGGCGAGAAATTCCGCGACTATTACGACTACGCCGAGACGCTGAAGACCGTGCCGTCGCATCGTGCGCTCGC
GCTGTTCCGCGGCCGCAACGCCGGCGTGCTGACGATCCGGCTGGGCCTCGGCGAGGAACTCGACGCGCAGGTGCCGCATC
CCGGCGAAGCGATGATCGCGCGCCATTTCGGCATCGCGAATCAGAATCGCCCGGCCGACAAATGGCTGAGCGACGTGTGC
CGCTGGTGCTGGCGCGTGAAGGTTCAGCCGCACATCGAGAACGAGCTGCTGACGCAGCTGCGCGAAACGGCCGAAACCGA
GGCGATCCGCGTCTTCGCGCGCAACCTGAAGGATCTGCTGCTTGCGGCGCCGGCCGGCCCGAAGGCCGTGATCGGTCTCG
ACCCCGGCTTGCGCACCGGCGTGAAGGTCGCCGTCGTCGACCGCACCGGCAAGCTGCTCGCGACGGACACAATCTATCCG
CATGAACCGCGTCGCGACTGGGACGGCTCGATCGCGAAGCTCGCGCGCCTCGCCGCGCAGACGCAGGCCGAACTGATCAG
CATCGGCAACGGCACCGCGTCGCGCGAAACAGACAAGCTCGCGAGCGAACTGATCGCGAAGCACCCCGAACTGCGGTTGC
AGAAGATCGTCGTGTCGGAAGCCGGCGCGTCGGTCTACTCGGCGTCCGAACTCGCGGCCAAGGAATTCCCGGAACTCGAC
GTATCGCTGCGCGGCGCCGTGTCGATCGCGCGCCGGCTGCAGGATCCGCTCGCCGAGCTCGTGAAGATCGAGCCGAAGGC
GATCGGCGTCGGCCAGTACCAGCACGACGTGAACCAGCGCGAGCTCGCCCGCTCGCTCGACGCGGTCGTCGAAGACTGCG
TGAACGCGGTCGGCGTCGATGCCAACACCGCGTCAGCGCCGCTGCTCGCGCGCGTGTCGGGGCTGAACGCGACGCTCGCG
CGCAATATCGTCGACTACCGCGACGCGAACGGCCCGTTCCCGTCGCGCGAGCACCTGCGCAAGGTGCCGCGCCTCGGCGA
CAAGACGTTCGAGCAGGCCGCCGGCTTCCTGCGGATCAACGGCGGCGAGAATCCGCTCGATCGCTCGTCGGTGCACCCGG
AGGCGTATCCGGTCGTCGAACGGATCCTCGCGAAGATCAACAAGCGCATCGACGACGTGCTCGGCAACCGCGACGCGCTG
TCGGGCCTGTCGCCCGCCGAATTCGTCGACGAACGTTTCGGCCTGCCGACGGTGCGCGACATCCTGTCCGAGCTCGAGAA
GCCCGGCCGCGATCCACGTCCGGAGTTCAAGACCGCGACGTTCCGCGAAGGCGTCGAGAAGGTGTCCGACCTCGTGCCCG
GCATGACGCTCGAAGGCGTCGTGACGAACGTCGCCGCATTCGGCGCGTTCGTCGACATCGGCGTCCATCAGGACGGGCTC
GTCCACGTATCCGCGATGTCGACGAAGTTCATCAAGGATCCGCACGAAGTCGTGAAGGCCGGCCAGGTCGTGAAGGTCAA
GGTGCTCGACGTCGACGTGAAGCGCCAGCGCATCTCGCTGACGATGCGGCTCGACGACGAAGCGGCGCCCGGCCTGTCGT
CGCGCGGCACGCAGGAGCGCGGCAACGCCGCACGCGGCGGCGCCCGCCCGCCCCGCGCGCGCGAACCCGAACCGGCCGGC
GCGATGGCCGCCGCGTTCGCGAAGCTCAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
GACGAGAGAAAAACGGGAAGTTGGCAACGTCGTAGGAAAGCTGCGGGACATGTGTCAAATTCTATCACCCCCGGCTGGAC
GCTCTGCCATTTATGGCAAA

Downstream 100 bases:

>100_bases
GCGTGCGGACCGTGCCGCAATGAGAAAAGCCCGCCGTCAGGCGGGCTTTTTGTTGGCGCAGCGTCTCGGCAAGCGAGCCG
CCAAGCGGCATGCGCGATCG

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MPRFTHPRHLVRRARHAARRAGHAGPRRDFSRQKLINDMTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIAR
YRKEVTGNLDDTQLRQLEERLLYLRELEDRRAAILSSIEEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAR
EAGLEPLAQALLANPMLDPHTEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHDRGVVSSAVVEGKE
NEEGEKFRDYYDYAETLKTVPSHRALALFRGRNAGVLTIRLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVC
RWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYP
HEPRRDWDGSIAKLARLAAQTQAELISIGNGTASRETDKLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPELD
VSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLA
RNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGNRDAL
SGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFREGVEKVSDLVPGMTLEGVVTNVAAFGAFVDIGVHQDGL
VHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRISLTMRLDDEAAPGLSSRGTQERGNAARGGARPPRAREPEPAG
AMAAAFAKLKQR

Sequences:

>Translated_812_residues
MPRFTHPRHLVRRARHAARRAGHAGPRRDFSRQKLINDMTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIAR
YRKEVTGNLDDTQLRQLEERLLYLRELEDRRAAILSSIEEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAR
EAGLEPLAQALLANPMLDPHTEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHDRGVVSSAVVEGKE
NEEGEKFRDYYDYAETLKTVPSHRALALFRGRNAGVLTIRLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVC
RWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYP
HEPRRDWDGSIAKLARLAAQTQAELISIGNGTASRETDKLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPELD
VSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLA
RNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGNRDAL
SGLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFREGVEKVSDLVPGMTLEGVVTNVAAFGAFVDIGVHQDGL
VHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRISLTMRLDDEAAPGLSSRGTQERGNAARGGARPPRAREPEPAG
AMAAAFAKLKQR
>Mature_811_residues
PRFTHPRHLVRRARHAARRAGHAGPRRDFSRQKLINDMTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARY
RKEVTGNLDDTQLRQLEERLLYLRELEDRRAAILSSIEEQGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIARE
AGLEPLAQALLANPMLDPHTEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHDRGVVSSAVVEGKEN
EEGEKFRDYYDYAETLKTVPSHRALALFRGRNAGVLTIRLGLGEELDAQVPHPGEAMIARHFGIANQNRPADKWLSDVCR
WCWRVKVQPHIENELLTQLRETAETEAIRVFARNLKDLLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPH
EPRRDWDGSIAKLARLAAQTQAELISIGNGTASRETDKLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPELDV
SLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVDANTASAPLLARVSGLNATLAR
NIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRINGGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGNRDALS
GLSPAEFVDERFGLPTVRDILSELEKPGRDPRPEFKTATFREGVEKVSDLVPGMTLEGVVTNVAAFGAFVDIGVHQDGLV
HVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRISLTMRLDDEAAPGLSSRGTQERGNAARGGARPPRAREPEPAGA
MAAAFAKLKQR

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=805, Percent_Identity=33.5403726708075, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=402, Percent_Identity=23.8805970149254, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87082262, Length=753, Percent_Identity=64.5418326693227, Blast_Score=937, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=42.1052631578947, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=761, Percent_Identity=29.9605781865966, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17552892, Length=261, Percent_Identity=29.5019157088123, Blast_Score=66, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6321552, Length=191, Percent_Identity=27.2251308900524, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI62484314, Length=803, Percent_Identity=30.8841843088418, Blast_Score=367, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 89234; Mature: 89102

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFTHPRHLVRRARHAARRAGHAGPRRDFSRQKLINDMTETVALKIVQRIATELSVQPR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEDRRAAILSSIEE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPMLDPH
HCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
TEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHDRGVVSSAVVEGKE
CCHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
NEEGEKFRDYYDYAETLKTVPSHRALALFRGRNAGVLTIRLGLGEELDAQVPHPGEAMIA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHH
RHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLKDLL
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSIAKLARLAAQ
HCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
TQAELISIGNGTASRETDKLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPELD
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
VSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
ANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRIN
CCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCEEEEC
GGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGNRDALSGLSPAEFVDERFGLPTVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCHHHH
ILSELEKPGRDPRPEFKTATFREGVEKVSDLVPGMTLEGVVTNVAAFGAFVDIGVHQDGL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCC
VHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRISLTMRLDDEAAPGLSSRGTQER
EEEEHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GNAARGGARPPRAREPEPAGAMAAAFAKLKQR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PRFTHPRHLVRRARHAARRAGHAGPRRDFSRQKLINDMTETVALKIVQRIATELSVQPR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEDRRAAILSSIEE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGKLTDELRAAIDAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPMLDPH
HCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
TEAAAYVDADKGVADVKAALDGARDILSEQFGETAELLGKLRDYLHDRGVVSSAVVEGKE
CCHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCCC
NEEGEKFRDYYDYAETLKTVPSHRALALFRGRNAGVLTIRLGLGEELDAQVPHPGEAMIA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHH
RHFGIANQNRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAETEAIRVFARNLKDLL
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKLLATDTIYPHEPRRDWDGSIAKLARLAAQ
HCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
TQAELISIGNGTASRETDKLASELIAKHPELRLQKIVVSEAGASVYSASELAAKEFPELD
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
VSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQRELARSLDAVVEDCVNAVGVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
ANTASAPLLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLRIN
CCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHCCCEEEEC
GGENPLDRSSVHPEAYPVVERILAKINKRIDDVLGNRDALSGLSPAEFVDERFGLPTVRD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCHHHH
ILSELEKPGRDPRPEFKTATFREGVEKVSDLVPGMTLEGVVTNVAAFGAFVDIGVHQDGL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCC
VHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRISLTMRLDDEAAPGLSSRGTQER
EEEEHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GNAARGGARPPRAREPEPAGAMAAAFAKLKQR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]