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The map label for this gene is arnB [H]

Identifier: 161524587

GI number: 161524587

Start: 1556530

End: 1557681

Strand: Reverse

Name: arnB [H]

Synonym: Bmul_1414

Alternate gene names: 161524587

Gene position: 1557681-1556530 (Counterclockwise)

Preceding gene: 161524588

Following gene: 161524586

Centisome position: 45.17

GC content: 67.88

Gene sequence:

>1152_bases
ATGAGCCAGACTACCGCTCCGTTTCTGCCGTTCACCCGCCCCGAGATCGACGAGGAAACCATCCAGGGCGTCGTCGAGGT
GCTGCGCTCGGGCTGGATCACCACGGGCCCGCAGTGCCAGAAGTTCGAGGCCGCGCTCTCCGAGTACTGCGGCGGCCGCC
CGGTGCGCGCGTTCAACTCCGGCACCTGCACGCTCGAGATCGGCCTGCGCATCGCGGGCGTCGGCCCCGGCGACGAAGTC
ATCACGACGCCGGCGTCGTGGGTGTCGACGAGCAACGTGATCCTCGAGACCGGCGCGACGCCCGTCTTCGCCGACATCGA
CCCCGTCACGCGCAACATCGATCTCGACAAGCTCGAACAGGCGATCACGCCGCGCACGAAGGCGATCATCCCCGTCTATC
TGGCCGGCCTGCCGGTCGACATGGACCGGCTGTACGCGATCGCGCGCGCACACGGCCTGCGCGTCGTCGAGGACGCGGCG
CAGGCGCTCGGCTCGACGTGGAACGGCAAGCGCATCGGCGCGATCGGCGACATCGTGTCGTTCAGCTTCCACGCGAACAA
GAACCTGACGACGATCGAAGGCGGCGCGCTCGTGCTGAACGACGAGGCCGAGGCGACGCTCGCGCAGAAATACCGGCTGC
AGGGCATCACGCGCACGGGCTTCGACGGCATGGACTGCGACGTGCTCGGCGGCAAGTACAACCTGACCGATGTCGCCGCG
CGCGTGGGCCTCGGGCAGCTGCCGCATCTCGAGCGCTTCACCGCGCAGCGCCGCGCGCTCGCGCGCGCCTACTTCGCGGC
GTTCGAGGGCGGCGCGGCGGTGCGGCTCGGCGTCGGGCTGCCGGTCGCCGATTTCACGAACAGCAACTGGCACATGTTCC
AGATCACGCTGCCGCTCGACCGGCTGTCGATCTCGCGCGCCGATTTCATGGCGCAGATGAAGGAACGCGGCATCGCCACG
GGCGTCCATTACCCGGCGATCCATCTGTTCACGCTGTACCGCGCGCGCGGTTTCCGCGAAGGCATGTTCCCGCATGCGGA
GCGCTACGGCGCATCGACCGTCACGCTGCCGCTGTTTACGCAGATGACGGAAGACGACGTGCGCCGCGTCGTCGATGCCA
CCAACCAGATTTGCGAACAATACGGAAAGTAA

Upstream 100 bases:

>100_bases
TACAAAAAATCACGCTACGAATCCGCCAACCGGTGTTTAATGCCGGTTTCGGACGGATCGCCCGACCCTTTTATTACACG
CCATTACAGGCTATGCGTTC

Downstream 100 bases:

>100_bases
GCGTACATGAATCACCTTGAAGCACGCGCCGGCCATCCGGGCGCGACGAGTCCGGAAGTGTCGGTCGTGATCCCCGTGTA
TAACGAGGAAGACGGCCTCG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSQTTAPFLPFTRPEIDEETIQGVVEVLRSGWITTGPQCQKFEAALSEYCGGRPVRAFNSGTCTLEIGLRIAGVGPGDEV
ITTPASWVSTSNVILETGATPVFADIDPVTRNIDLDKLEQAITPRTKAIIPVYLAGLPVDMDRLYAIARAHGLRVVEDAA
QALGSTWNGKRIGAIGDIVSFSFHANKNLTTIEGGALVLNDEAEATLAQKYRLQGITRTGFDGMDCDVLGGKYNLTDVAA
RVGLGQLPHLERFTAQRRALARAYFAAFEGGAAVRLGVGLPVADFTNSNWHMFQITLPLDRLSISRADFMAQMKERGIAT
GVHYPAIHLFTLYRARGFREGMFPHAERYGASTVTLPLFTQMTEDDVRRVVDATNQICEQYGK

Sequences:

>Translated_383_residues
MSQTTAPFLPFTRPEIDEETIQGVVEVLRSGWITTGPQCQKFEAALSEYCGGRPVRAFNSGTCTLEIGLRIAGVGPGDEV
ITTPASWVSTSNVILETGATPVFADIDPVTRNIDLDKLEQAITPRTKAIIPVYLAGLPVDMDRLYAIARAHGLRVVEDAA
QALGSTWNGKRIGAIGDIVSFSFHANKNLTTIEGGALVLNDEAEATLAQKYRLQGITRTGFDGMDCDVLGGKYNLTDVAA
RVGLGQLPHLERFTAQRRALARAYFAAFEGGAAVRLGVGLPVADFTNSNWHMFQITLPLDRLSISRADFMAQMKERGIAT
GVHYPAIHLFTLYRARGFREGMFPHAERYGASTVTLPLFTQMTEDDVRRVVDATNQICEQYGK
>Mature_382_residues
SQTTAPFLPFTRPEIDEETIQGVVEVLRSGWITTGPQCQKFEAALSEYCGGRPVRAFNSGTCTLEIGLRIAGVGPGDEVI
TTPASWVSTSNVILETGATPVFADIDPVTRNIDLDKLEQAITPRTKAIIPVYLAGLPVDMDRLYAIARAHGLRVVEDAAQ
ALGSTWNGKRIGAIGDIVSFSFHANKNLTTIEGGALVLNDEAEATLAQKYRLQGITRTGFDGMDCDVLGGKYNLTDVAAR
VGLGQLPHLERFTAQRRALARAYFAAFEGGAAVRLGVGLPVADFTNSNWHMFQITLPLDRLSISRADFMAQMKERGIATG
VHYPAIHLFTLYRARGFREGMFPHAERYGASTVTLPLFTQMTEDDVRRVVDATNQICEQYGK

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=41.6666666666667, Blast_Score=254, Evalue=4e-69,
Organism=Escherichia coli, GI2367285, Length=372, Percent_Identity=32.7956989247312, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41758; Mature: 41627

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTTAPFLPFTRPEIDEETIQGVVEVLRSGWITTGPQCQKFEAALSEYCGGRPVRAFNS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECC
GTCTLEIGLRIAGVGPGDEVITTPASWVSTSNVILETGATPVFADIDPVTRNIDLDKLEQ
CEEEEEEEEEEEECCCCCCEEECCHHHHCCCCEEEECCCCCEEECCCCHHCCCCHHHHHH
AITPRTKAIIPVYLAGLPVDMDRLYAIARAHGLRVVEDAAQALGSTWNGKRIGAIGDIVS
HHCCCHHEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHE
FSFHANKNLTTIEGGALVLNDEAEATLAQKYRLQGITRTGFDGMDCDVLGGKYNLTDVAA
EEEECCCCCEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLPHLERFTAQRRALARAYFAAFEGGAAVRLGVGLPVADFTNSNWHMFQITLPLD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCEEEEEEEECHH
RLSISRADFMAQMKERGIATGVHYPAIHLFTLYRARGFREGMFPHAERYGASTVTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEHHHH
QMTEDDVRRVVDATNQICEQYGK
HCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQTTAPFLPFTRPEIDEETIQGVVEVLRSGWITTGPQCQKFEAALSEYCGGRPVRAFNS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECC
GTCTLEIGLRIAGVGPGDEVITTPASWVSTSNVILETGATPVFADIDPVTRNIDLDKLEQ
CEEEEEEEEEEEECCCCCCEEECCHHHHCCCCEEEECCCCCEEECCCCHHCCCCHHHHHH
AITPRTKAIIPVYLAGLPVDMDRLYAIARAHGLRVVEDAAQALGSTWNGKRIGAIGDIVS
HHCCCHHEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHE
FSFHANKNLTTIEGGALVLNDEAEATLAQKYRLQGITRTGFDGMDCDVLGGKYNLTDVAA
EEEECCCCCEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHH
RVGLGQLPHLERFTAQRRALARAYFAAFEGGAAVRLGVGLPVADFTNSNWHMFQITLPLD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCEEEEEEEECHH
RLSISRADFMAQMKERGIATGVHYPAIHLFTLYRARGFREGMFPHAERYGASTVTLPLFT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEHHHH
QMTEDDVRRVVDATNQICEQYGK
HCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA