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The map label for this gene is ygfZ [C]

Identifier: 161524552

GI number: 161524552

Start: 1522732

End: 1523769

Strand: Reverse

Name: ygfZ [C]

Synonym: Bmul_1379

Alternate gene names: 161524552

Gene position: 1523769-1522732 (Counterclockwise)

Preceding gene: 161524562

Following gene: 161524551

Centisome position: 44.19

GC content: 71.68

Gene sequence:

>1038_bases
ATGAGCACACCGTTCGCTTCACCGGCTGCCCAGGCTGCCGCATCCGCCCCGCTCCCCGTTTTTCCCCGTCCGTCCGCCGC
CGATTTCGATGCGCCGGGCGCGTACATGCCGCTCGCGCAGTTCGGCGTGATCGACGTGGCCGGCGACGATGCGGCGACGT
TCCTGCACAGCCAGCTCACCAACGACATCGAGCATCTGGACGCCGCCAGCGCGCGGCTCAGCGGCTACTGCTCGCCGAAG
GGCCGGCTGCTCGCGTCGTTCCTCGCGTGGCGCGCGGGCCACGACGTGCGCCTGCTGGTGTCGAAGGACATTCAGGCCGC
CGTGCAGAAGCGGCTGTCGATGTTCGTGCTGCGTGCGAAGGCGAAACTCGCCGACGCGAGCGACGCGCTCGCGGTGGTCG
GCTTCGCGGGCGACGTGCGCGACGCGCTGTCGGGCATCTTCGATGCGCTGCCGGACGGCGTGCACGTGAAGGTCGACGGC
CCTGCCGGCGCGCTGATCCGCGTGCCGGACGCGGCCGGCCGCAAGCGTTACCTGTGGATCGGCCCGCGCGCGGAAGTCGA
CGCGCGCCTCGCCGCGCTTGACGGCAAGCTGCCGGTCGTGTCGCCGGCCGTGTGGGACTGGCTCGACGTACGTGCCGGCG
AGCCGCGCATCACGCAGCCGGTCGTCGAACAGTTCGTCCCGCAGATGGTGAATTTCGACGTGATCGGCGCGGTCAACTTC
CGCAAGGGCTGCTATCCGGGCCAGGAAGTCGTCGCGCGCAGCCAGTATCGCGGCACGATCAAGCGCCGCACCGCGCTCGC
GCACGTCGCGGCCGACACCGACACCGTGCGTGCCGGCGTCGAGCTGTTCCACAGCGACGATCCGGGCCAGCCCTGCGGCA
TGATCGTCAATGCGGCGGCGGCGCCCGCGGGCGGCGTCGACGCGCTCGTCGAGATCAAGCTCGCCGCGCTCGATAGCGGC
AGCGTGCACGTCGGCTCGGCCGCCGGGCCCGCGCTCGCGTTCGACGCACTGCCGTACGCGTGGCCGACCGACGCATGA

Upstream 100 bases:

>100_bases
GGCGCATTTCTTCAGTAGGGACATGGAACGTGACTCAGGTAAGACCCATATAATACTTGCTCGCCTCCGTCAAAGTCAGG
GTTGACTGTTCCCTCATTCC

Downstream 100 bases:

>100_bases
CGCACTGACAACCCGTTCGCGCCGCAGCGCCTTGTGCGCCGGCCGCGCGACGTTTCCTGCGAGAGATTCGCCCGATGTGT
CTGATTGCCTTCGACTGGCA

Product: folate-binding protein YgfZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSTPFASPAAQAAASAPLPVFPRPSAADFDAPGAYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPK
GRLLASFLAWRAGHDVRLLVSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDG
PAGALIRVPDAAGRKRYLWIGPRAEVDARLAALDGKLPVVSPAVWDWLDVRAGEPRITQPVVEQFVPQMVNFDVIGAVNF
RKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDTVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDALVEIKLAALDSG
SVHVGSAAGPALAFDALPYAWPTDA

Sequences:

>Translated_345_residues
MSTPFASPAAQAAASAPLPVFPRPSAADFDAPGAYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPK
GRLLASFLAWRAGHDVRLLVSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDG
PAGALIRVPDAAGRKRYLWIGPRAEVDARLAALDGKLPVVSPAVWDWLDVRAGEPRITQPVVEQFVPQMVNFDVIGAVNF
RKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDTVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDALVEIKLAALDSG
SVHVGSAAGPALAFDALPYAWPTDA
>Mature_344_residues
STPFASPAAQAAASAPLPVFPRPSAADFDAPGAYMPLAQFGVIDVAGDDAATFLHSQLTNDIEHLDAASARLSGYCSPKG
RLLASFLAWRAGHDVRLLVSKDIQAAVQKRLSMFVLRAKAKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDGP
AGALIRVPDAAGRKRYLWIGPRAEVDARLAALDGKLPVVSPAVWDWLDVRAGEPRITQPVVEQFVPQMVNFDVIGAVNFR
KGCYPGQEVVARSQYRGTIKRRTALAHVAADTDTVRAGVELFHSDDPGQPCGMIVNAAAAPAGGVDALVEIKLAALDSGS
VHVGSAAGPALAFDALPYAWPTDA

Specific function: Folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA-modifying ygfZ family [H]

Homologues:

Organism=Escherichia coli, GI1789265, Length=251, Percent_Identity=27.8884462151394, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 36074; Mature: 35943

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFASPAAQAAASAPLPVFPRPSAADFDAPGAYMPLAQFGVIDVAGDDAATFLHSQLT
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHH
NDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVRLLVSKDIQAAVQKRLSMFVLRAK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
AKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDGPAGALIRVPDAAGRKRYLWI
HHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCEEEEEE
GPRAEVDARLAALDGKLPVVSPAVWDWLDVRAGEPRITQPVVEQFVPQMVNFDVIGAVNF
CCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEECC
RKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDTVRAGVELFHSDDPGQPCGMIVNAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCHHHEEECCC
APAGGVDALVEIKLAALDSGSVHVGSAAGPALAFDALPYAWPTDA
CCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STPFASPAAQAAASAPLPVFPRPSAADFDAPGAYMPLAQFGVIDVAGDDAATFLHSQLT
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHH
NDIEHLDAASARLSGYCSPKGRLLASFLAWRAGHDVRLLVSKDIQAAVQKRLSMFVLRAK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHH
AKLADASDALAVVGFAGDVRDALSGIFDALPDGVHVKVDGPAGALIRVPDAAGRKRYLWI
HHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCEEEEEE
GPRAEVDARLAALDGKLPVVSPAVWDWLDVRAGEPRITQPVVEQFVPQMVNFDVIGAVNF
CCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEECC
RKGCYPGQEVVARSQYRGTIKRRTALAHVAADTDTVRAGVELFHSDDPGQPCGMIVNAAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCHHHEEECCC
APAGGVDALVEIKLAALDSGSVHVGSAAGPALAFDALPYAWPTDA
CCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA