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The map label for this gene is 161524463

Identifier: 161524463

GI number: 161524463

Start: 1420197

End: 1420784

Strand: Direct

Name: 161524463

Synonym: Bmul_1290

Alternate gene names: NA

Gene position: 1420197-1420784 (Clockwise)

Preceding gene: 161524462

Following gene: 161524473

Centisome position: 41.18

GC content: 67.18

Gene sequence:

>588_bases
GTGACCCAACTGACTCTGCCGGGCATCGAAGCGCCGCGGCTGCATCATCGGCTGTTTTTTGCGGTGCAGCCCGATCCGCA
TACCGCTGCGCGGATTGCCGATGCGGCGCGCCGTCTGTGGCCGGACGCCGCCCGCACCGGGCACTGGGTCGATACGGCGC
GCCTGCATGTGACGCTGCATTCGCTCGGCGAGTTCATGCACATACCGCCGGACGTGATTGCCCGTGCCCGCGAGGCGGCG
CAGCGCGTCCGCGCGGAGCCGTTCGACGTGTCGTTCGACCGCATCGTCAGCTTCAGCGGCCGCACCGACGATCGGCCCTG
GGTGCTGACCGTGTCCGACGTTTCGCATGAACTGATCGACCTGCAGCGGCAACTCGTCGAAGCACTGAAAAGGACGGGCC
TTCGACCGCCGCGCACGAGCTTTACGCCGCATGTCACGCTGCGCTACGACCGCAGCCGGCGTGCGCCGCACACGATCGAG
CCGATCGCGTGGACGGTCAGCGAGTTCGTGTTGATCGACAGTTGGCTCGGCAAGACGCGCCATGACGCGATCGGTCGCTG
GCCGCTCGATCGAACTACGCCGATCTGA

Upstream 100 bases:

>100_bases
GGCAACTCAATCTGCCGGGCATCGCTTTTCCGCCGCAAGCGGCACGTCGTTCGATTGACGATAATGGACGCTTGTCCATC
GGCATATCGCTAATCGCGCC

Downstream 100 bases:

>100_bases
CGGCATCACGCAAACGGCGCCGATGCCGGTTCAGCGGCGCGACCGTTCGGCGAGCGCCGATGCCCGCTCGACGGCCCGCC
GCGCGACATCGACGACGCCC

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase; Phosphoesterase HXTX; 2-5' RNA Ligase-Like Protein; Ligase; Ligase Protein; 2h Phosphoesterase

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTQLTLPGIEAPRLHHRLFFAVQPDPHTAARIADAARRLWPDAARTGHWVDTARLHVTLHSLGEFMHIPPDVIARAREAA
QRVRAEPFDVSFDRIVSFSGRTDDRPWVLTVSDVSHELIDLQRQLVEALKRTGLRPPRTSFTPHVTLRYDRSRRAPHTIE
PIAWTVSEFVLIDSWLGKTRHDAIGRWPLDRTTPI

Sequences:

>Translated_195_residues
MTQLTLPGIEAPRLHHRLFFAVQPDPHTAARIADAARRLWPDAARTGHWVDTARLHVTLHSLGEFMHIPPDVIARAREAA
QRVRAEPFDVSFDRIVSFSGRTDDRPWVLTVSDVSHELIDLQRQLVEALKRTGLRPPRTSFTPHVTLRYDRSRRAPHTIE
PIAWTVSEFVLIDSWLGKTRHDAIGRWPLDRTTPI
>Mature_194_residues
TQLTLPGIEAPRLHHRLFFAVQPDPHTAARIADAARRLWPDAARTGHWVDTARLHVTLHSLGEFMHIPPDVIARAREAAQ
RVRAEPFDVSFDRIVSFSGRTDDRPWVLTVSDVSHELIDLQRQLVEALKRTGLRPPRTSFTPHVTLRYDRSRRAPHTIEP
IAWTVSEFVLIDSWLGKTRHDAIGRWPLDRTTPI

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22371; Mature: 22240

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLTLPGIEAPRLHHRLFFAVQPDPHTAARIADAARRLWPDAARTGHWVDTARLHVTLH
CCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHCCCCCEEHHEEEEEHH
SLGEFMHIPPDVIARAREAAQRVRAEPFDVSFDRIVSFSGRTDDRPWVLTVSDVSHELID
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCEEEEHHHHHHHHHH
LQRQLVEALKRTGLRPPRTSFTPHVTLRYDRSRRAPHTIEPIAWTVSEFVLIDSWLGKTR
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
HDAIGRWPLDRTTPI
HHCCCCCCCCCCCCC
>Mature Secondary Structure 
TQLTLPGIEAPRLHHRLFFAVQPDPHTAARIADAARRLWPDAARTGHWVDTARLHVTLH
CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHCCCCCEEHHEEEEEHH
SLGEFMHIPPDVIARAREAAQRVRAEPFDVSFDRIVSFSGRTDDRPWVLTVSDVSHELID
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCEEEEHHHHHHHHHH
LQRQLVEALKRTGLRPPRTSFTPHVTLRYDRSRRAPHTIEPIAWTVSEFVLIDSWLGKTR
HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
HDAIGRWPLDRTTPI
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA