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The map label for this gene is rnfH [H]

Identifier: 161524452

GI number: 161524452

Start: 1408578

End: 1408901

Strand: Direct

Name: rnfH [H]

Synonym: Bmul_1279

Alternate gene names: 161524452

Gene position: 1408578-1408901 (Clockwise)

Preceding gene: 161524451

Following gene: 161524456

Centisome position: 40.85

GC content: 67.9

Gene sequence:

>324_bases
ATGCTGTCGATCGAAGTCTGCTATGCGCTGCCCGACCGTCAGACGCTGATTCCGGTGTCGCTGCCCGAAGGCGCGACCGT
GCGCGCGGCGATCGAGGCGAGCGGCGTGCTCGCGCTGCATCCCGAAATCGATCTCGCGCGCGCGAAAACCGGCATCTACG
GCAAGCTCGCGTCGCTCGACGCGCCGCTCGCCGATCACGATCGCGTCGAGATCTATCGGCCGCTGATCGTCGATCCGAAG
ATCGCGCGCCAGCGGCGTGTCGACAAGGCGCGCCGCGACGGCTCCGTCGAAGGCCGCAAGTGGATGCACAAGGACGCGCG
CTGA

Upstream 100 bases:

>100_bases
CTCGAAAAGATCATCGGTCCGGTGTTCAACCATATCGCGAACACGTTCGTCGATTCGTTCGTGAAGCGCGCGGACCAGCG
CTACGGCAAAGGGTGAGGCG

Downstream 100 bases:

>100_bases
GCCGCGTGCGTTCGGCCCATTCGTCCGAGCGAAGCGGCCGCGCTCAGTGCGCGGCAGCATTCGGATCGATCGCGGCGCGC
GTCGGCGTGTTGCCGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLSIEVCYALPDRQTLIPVSLPEGATVRAAIEASGVLALHPEIDLARAKTGIYGKLASLDAPLADHDRVEIYRPLIVDPK
IARQRRVDKARRDGSVEGRKWMHKDAR

Sequences:

>Translated_107_residues
MLSIEVCYALPDRQTLIPVSLPEGATVRAAIEASGVLALHPEIDLARAKTGIYGKLASLDAPLADHDRVEIYRPLIVDPK
IARQRRVDKARRDGSVEGRKWMHKDAR
>Mature_107_residues
MLSIEVCYALPDRQTLIPVSLPEGATVRAAIEASGVLALHPEIDLARAKTGIYGKLASLDAPLADHDRVEIYRPLIVDPK
IARQRRVDKARRDGSVEGRKWMHKDAR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=89, Percent_Identity=53.9325842696629, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 11880; Mature: 11880

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIEVCYALPDRQTLIPVSLPEGATVRAAIEASGVLALHPEIDLARAKTGIYGKLASLD
CCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCCHHCCCCCCEEECCCC
APLADHDRVEIYRPLIVDPKIARQRRVDKARRDGSVEGRKWMHKDAR
CCCCCCCCEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSIEVCYALPDRQTLIPVSLPEGATVRAAIEASGVLALHPEIDLARAKTGIYGKLASLD
CCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCCCHHCCCCCCEEECCCC
APLADHDRVEIYRPLIVDPKIARQRRVDKARRDGSVEGRKWMHKDAR
CCCCCCCCEEEECCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA