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The map label for this gene is thiD [H]

Identifier: 161524409

GI number: 161524409

Start: 1357847

End: 1358656

Strand: Reverse

Name: thiD [H]

Synonym: Bmul_1236

Alternate gene names: 161524409

Gene position: 1358656-1357847 (Counterclockwise)

Preceding gene: 161524410

Following gene: 161524404

Centisome position: 39.4

GC content: 71.98

Gene sequence:

>810_bases
ATGACGCATCCGATACCCAACGTGCTGACGATCGCCGGCTCCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACCTGAA
GACGTTCTCCGCACTCGGTGCATACGGCGCGAGCGCGATCACCGCGCTGACGGCGCAGAACACGCGCGGCGTCACGGGCG
TGCACGCGCCCGATCCCGCGTTCGTGACCGCGCAGCTCGACGCGGTGTTCGGCGACATCCGCATCGATGCCGTGAAGATC
GGCATGCTCGCGAACGCGCCGATCGTGCACGCCGTCGCCGACGCGCTGCGGCGTTACGCGCCGCGCTTCGTCGTGCTCGA
CACGGTGATGATCTCGAAGAGCGCGCATGCGCTGCTCGCGCCCGACGCCGTCGACGCACTGCGCGACGCGCTACTGCCGC
TCGCGACGGTCGTCACGCCGAACCTGCCGGAAGCGGCCGCGCTGCTCGGCGACGCGCCGGCGACGACCGAAGACGACATG
GTGCGCCAAGGCCGCGCGCTGCTGCAGACCGGCGCACGCGCGGTGCTGATGAAAGGCGGCCACCTGCCCGATGCGGCCGC
GAGCCCCGACTGGCTCGTCGCGCAGGCGGGCGCCGTGCGGCTCGACAGTGCGCGCGTGCCGGTCAGCAATACGCACGGGA
CGGGTTGCACGCTGTCGTCCGCGATCGCCGCACTGCTGCCGCAGCAGCCCGACCTCGAAAGCGCGGTGCGCGAAGCGAAG
GCCTATCTGACCGGCGCAATCGCCGCGAGCGGGCAGCTCGACGTCGGCCACGGCGTCGGCCCCGTCCACCATTTCCATCG
CTGGTGGTGA

Upstream 100 bases:

>100_bases
CAGTTCGATTCGGTCGCGCTGATCGGCGAATCGCGGCACTGACGCTACACTTCCCGTTTCCGTCTGTTCACGCCGGCCGT
CGAGCCGGCGCGTTGCCATC

Downstream 100 bases:

>100_bases
GCCCGCGCCGGGGCTCGCTCAGCCGGCCAGCGCGGCAAAGGCCTGCGCGCGCGCCGGCCAGTCGTCCGGCACGATGAAAC
CGCGCGCCGTCTCGTACCAC

Product: phosphomethylpyrimidine kinase

Products: NA

Alternate protein names: Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTHPIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASAITALTAQNTRGVTGVHAPDPAFVTAQLDAVFGDIRIDAVKI
GMLANAPIVHAVADALRRYAPRFVVLDTVMISKSAHALLAPDAVDALRDALLPLATVVTPNLPEAAALLGDAPATTEDDM
VRQGRALLQTGARAVLMKGGHLPDAAASPDWLVAQAGAVRLDSARVPVSNTHGTGCTLSSAIAALLPQQPDLESAVREAK
AYLTGAIAASGQLDVGHGVGPVHHFHRWW

Sequences:

>Translated_269_residues
MTHPIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASAITALTAQNTRGVTGVHAPDPAFVTAQLDAVFGDIRIDAVKI
GMLANAPIVHAVADALRRYAPRFVVLDTVMISKSAHALLAPDAVDALRDALLPLATVVTPNLPEAAALLGDAPATTEDDM
VRQGRALLQTGARAVLMKGGHLPDAAASPDWLVAQAGAVRLDSARVPVSNTHGTGCTLSSAIAALLPQQPDLESAVREAK
AYLTGAIAASGQLDVGHGVGPVHHFHRWW
>Mature_268_residues
THPIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASAITALTAQNTRGVTGVHAPDPAFVTAQLDAVFGDIRIDAVKIG
MLANAPIVHAVADALRRYAPRFVVLDTVMISKSAHALLAPDAVDALRDALLPLATVVTPNLPEAAALLGDAPATTEDDMV
RQGRALLQTGARAVLMKGGHLPDAAASPDWLVAQAGAVRLDSARVPVSNTHGTGCTLSSAIAALLPQQPDLESAVREAKA
YLTGAIAASGQLDVGHGVGPVHHFHRWW

Specific function: Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. Shows no activity with pyridoxal, pyridoxamine or pyridoxine [H]

COG id: COG0351

COG function: function code H; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiD family [H]

Homologues:

Organism=Escherichia coli, GI1788420, Length=264, Percent_Identity=61.7424242424242, Blast_Score=316, Evalue=8e-88,
Organism=Saccharomyces cerevisiae, GI6325378, Length=278, Percent_Identity=31.6546762589928, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324997, Length=277, Percent_Identity=32.8519855595668, Blast_Score=112, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6324517, Length=277, Percent_Identity=31.4079422382672, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013749
- InterPro:   IPR004399 [H]

Pfam domain/function: PF08543 Phos_pyr_kin [H]

EC number: =2.7.1.49; =2.7.4.7 [H]

Molecular weight: Translated: 27534; Mature: 27402

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASAITALTAQNTRGVTGVHAPDPA
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCCCC
FVTAQLDAVFGDIRIDAVKIGMLANAPIVHAVADALRRYAPRFVVLDTVMISKSAHALLA
EEEEEHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCEEEC
PDAVDALRDALLPLATVVTPNLPEAAALLGDAPATTEDDMVRQGRALLQTGARAVLMKGG
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
HLPDAAASPDWLVAQAGAVRLDSARVPVSNTHGTGCTLSSAIAALLPQQPDLESAVREAK
CCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
AYLTGAIAASGQLDVGHGVGPVHHFHRWW
HHHHHHHHCCCCEECCCCCCHHHHHHCCC
>Mature Secondary Structure 
THPIPNVLTIAGSDSGGGAGIQADLKTFSALGAYGASAITALTAQNTRGVTGVHAPDPA
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCCCC
FVTAQLDAVFGDIRIDAVKIGMLANAPIVHAVADALRRYAPRFVVLDTVMISKSAHALLA
EEEEEHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCCCEEEC
PDAVDALRDALLPLATVVTPNLPEAAALLGDAPATTEDDMVRQGRALLQTGARAVLMKGG
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
HLPDAAASPDWLVAQAGAVRLDSARVPVSNTHGTGCTLSSAIAALLPQQPDLESAVREAK
CCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
AYLTGAIAASGQLDVGHGVGPVHHFHRWW
HHHHHHHHCCCCEECCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10075431; 9097040; 9278503 [H]