| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161524407
Identifier: 161524407
GI number: 161524407
Start: 1355772
End: 1356848
Strand: Direct
Name: 161524407
Synonym: Bmul_1234
Alternate gene names: NA
Gene position: 1355772-1356848 (Clockwise)
Preceding gene: 161524406
Following gene: 161524408
Centisome position: 39.32
GC content: 73.72
Gene sequence:
>1077_bases ATGGCGTGGGCTGAAGCGGCGCTCGAGGAGATGGGCCTCGCGCAGATCTGGGTACGGCGCGGCCAGCGCGCGAGCGGCGG GGCAGCCGACGATGCGGCCGTCGCGGCGCAGTCGGAAGCCGCCGGCGCCGGCGCGGCGACCGTTGCCGCCGCATCGGACG CGCTGCCGTCGCGGCCCGCGGTGGCGCGCGAAGCGCACGAGAAGGCTGCCGAACCGGTCGCGCGTCGGACGGACGACGGT GCGTCGACAGGCGCGCCGATGCGCGCTGCTGCGCCCGTCGCCGATGGCGATCCTGTCGACACGCCGCGTGCGTCGCAGCC GGCCGATGACGTGCCCGGCGCGCTCACGGCGATCATGTCGGCCCCGGCCGCCTCGCCGTCCGCCGACATGCCGCCCGCCG CTGACGACGATTTCGCGTGGTTCGACGCCGCGCCGCCCGGCGATTCGGCAACGGCGGCCGAGCCGCGCGCGGCCGAAGCG CCGGTCGCCATGCTCGACTGGGACGCGCTCGCCGCGCGCGTGGCTGACTGCACGCGCTGCCGCCTGTGCGAGAAGCGGAC GAACACCGTATTCGGCGTCGGCGACCGCGAAGCGGACTGGATGCTGATCGGCGAGGCGCCGGGCGAAAACGAGGACAAGC AGGGCGAGCCGTTCGTCGGTCAGGCCGGCAAGCTGCTCGACAACATGCTGCGCTCGCTGTCGCTGCAGCGCGGCGAGAAC GTGTACATCGCGAACGTGATCAAGTGCCGGCCGCCGGGCAACCGCAATCCGGAGCCCGACGAGGTCGCGCGCTGCGAGCC GTATCTGCAGCGGCAGGTCGCGCTGGTCAAGCCGAAGCTGATCGTCGCGCTCGGCCGCTTCGCCGCGCAGACGCTGCTGA AGACCGACGCGAGCATCGCATCGCTGCGCGGCCGCGTGCACGCTTACGAAGGCGTGCCGGTGATCGTCACGTACCACCCC GCGTATCTGTTGCGCAGCCTGCCGGACAAGGCGAAGGCATGGGCGGACCTGTGCCTGGCGCGCGACACCTTCGCGGCGTC GCCCGCTCCCGACGCGCCGTCGCCGGCCGCGCCATGA
Upstream 100 bases:
>100_bases GTGACGATCGGCCGGCGCAAGAACTACTATCCGGCGCGGCATCGCAGCCGGGAGGACGCGATCGTGATGCGTCTGACGCT GAACAAGGACGGAGGCGCGC
Downstream 100 bases:
>100_bases CCGGGCGCGCGGCGTTCGCCTTCGTCGATACGCTGCGCGACGTCGCGGTCCGCGACCTCGGCTGGCTGCTCGCCAGTCCG AGCCTGTTGACTGCCGCGCC
Product: phage SPO1 DNA polymerase-like protein
Products: NA
Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Glycosylase; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MAWAEAALEEMGLAQIWVRRGQRASGGAADDAAVAAQSEAAGAGAATVAAASDALPSRPAVAREAHEKAAEPVARRTDDG ASTGAPMRAAAPVADGDPVDTPRASQPADDVPGALTAIMSAPAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEA PVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGEN VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIASLRGRVHAYEGVPVIVTYHP AYLLRSLPDKAKAWADLCLARDTFAASPAPDAPSPAAP
Sequences:
>Translated_358_residues MAWAEAALEEMGLAQIWVRRGQRASGGAADDAAVAAQSEAAGAGAATVAAASDALPSRPAVAREAHEKAAEPVARRTDDG ASTGAPMRAAAPVADGDPVDTPRASQPADDVPGALTAIMSAPAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEA PVAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGEN VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIASLRGRVHAYEGVPVIVTYHP AYLLRSLPDKAKAWADLCLARDTFAASPAPDAPSPAAP >Mature_357_residues AWAEAALEEMGLAQIWVRRGQRASGGAADDAAVAAQSEAAGAGAATVAAASDALPSRPAVAREAHEKAAEPVARRTDDGA STGAPMRAAAPVADGDPVDTPRASQPADDVPGALTAIMSAPAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEAP VAMLDWDALAARVADCTRCRLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGENV YIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIASLRGRVHAYEGVPVIVTYHPA YLLRSLPDKAKAWADLCLARDTFAASPAPDAPSPAAP
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37269; Mature: 37138
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWAEAALEEMGLAQIWVRRGQRASGGAADDAAVAAQSEAAGAGAATVAAASDALPSRPA CCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH VAREAHEKAAEPVARRTDDGASTGAPMRAAAPVADGDPVDTPRASQPADDVPGALTAIMS HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH APAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRC CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHH RLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGEN HHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIA EEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH SLRGRVHAYEGVPVIVTYHPAYLLRSLPDKAKAWADLCLARDTFAASPAPDAPSPAAP HHHCCEEEECCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AWAEAALEEMGLAQIWVRRGQRASGGAADDAAVAAQSEAAGAGAATVAAASDALPSRPA CHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCH VAREAHEKAAEPVARRTDDGASTGAPMRAAAPVADGDPVDTPRASQPADDVPGALTAIMS HHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH APAASPSADMPPAADDDFAWFDAAPPGDSATAAEPRAAEAPVAMLDWDALAARVADCTRC CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHH RLCEKRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRSLSLQRGEN HHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDASIA EEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHH SLRGRVHAYEGVPVIVTYHPAYLLRSLPDKAKAWADLCLARDTFAASPAPDAPSPAAP HHHCCEEEECCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA