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The map label for this gene is ylbK [H]

Identifier: 161524392

GI number: 161524392

Start: 1339382

End: 1340431

Strand: Reverse

Name: ylbK [H]

Synonym: Bmul_1219

Alternate gene names: 161524392

Gene position: 1340431-1339382 (Counterclockwise)

Preceding gene: 161524395

Following gene: 161524375

Centisome position: 38.87

GC content: 69.81

Gene sequence:

>1050_bases
ATGTGCGCGCCGCGGCCGCCTGCCGGCGCCGCGCCGGTCGCGCGGACCTTGCCGCGCCGCCGCTCGCGAACCTATCGCCG
CGCGGGCCCGATGGCCCGCCGCCCAGCCGCCGGAGAATCTTCGATGTCGTCCCCTCGCCTGTCGCGCCGCCAGTTCACGA
TCGCGTGCGCGTCCGCCAGCCTAGCCGCCTGCACGTCCTTCGGCGGCAAATCGCGCTCCGACAGCGCATCGAGTGCGACG
CAGCCGCACGACAAGCCGGTCAAGATCGGCATCGCGCTCGGCGGCGGCGCCGCGCGCGGCTTTTCGCATATCGGCGTGCT
GAAGGCGCTCGAGGCACGCGGCATCGCGATCGACCTCGTCGCCGGCACGAGCGCGGGCTCGGTGGTCGGCGCGCTGTATG
CGTCGGGGATGAACGGCTTGCAGATCAACAAGATCGCGCTCGACATGGATCAGGCGTCGATCAGCGACTGGGCGCTGCCG
TTTCGCTCGCGCGGGCTGCTGCAGGGCGTCGCGCTGCAGAACTTCCTGAACAAGGCGCTCAACAACCGGCCGATCGAGAA
AATGCCGAAGCCGCTCGGCATCGTCGCCACTGATTTGCAGAGCGGCCAGCCGATCCTGTTCCAGCAGGGCAATACGGGGC
TTGCGGTGCGCGCGTCGTGCAGCGTGCCGTCCGTGTTCGAGCCCGTGAAGATCGGCAGCCGCGAATACGTCGACGGCGGG
CTCGTGAGCCCGGTGCCCGCCTCGTTCGCGCGCCGCATGGGCGCGAACTTCGTGATCGCGGTCGACATCTCGGCGCGCCC
CGACGGCGCGGCGACCAACAACCCGATCGAGATGCTGCTGCAGACGTTCACGATCATGGGCCAGACGATCAAGACCTACG
AACTCGACAAGTACGCGGACGTCGTGATCCGGCCGAATCTCGCCGCGATGGGCGGCAGCGACTTCAACCAGCGCAACGCG
GCGATCCTCGCGGGCGAGGAAGCGGTCGCGCGCATCATGCCGGAACTGCAGCGCAAGCTCGCCGCGGCGCGCGGCGTCCC
CGTCGCGTAA

Upstream 100 bases:

>100_bases
GGCCATGCGAGCGGCTGCGTGCCGGCGACGCCCGGAACGGGAAAGAAGCCGGAATTATACTCGCGCCGCCCATCGCGCCA
AGCGCGCCGCTTGCTTTATG

Downstream 100 bases:

>100_bases
CGCACGGCGCCGCCGTCGTCGCGCCGCAAAGACAAAAGCCCCTGCCGCCTTCCGGCGACAGGGGCTTGTCCATTCCGTCC
GACCCGGACGAGAACGCGTC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MCAPRPPAGAAPVARTLPRRRSRTYRRAGPMARRPAAGESSMSSPRLSRRQFTIACASASLAACTSFGGKSRSDSASSAT
QPHDKPVKIGIALGGGAARGFSHIGVLKALEARGIAIDLVAGTSAGSVVGALYASGMNGLQINKIALDMDQASISDWALP
FRSRGLLQGVALQNFLNKALNNRPIEKMPKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSVFEPVKIGSREYVDGG
LVSPVPASFARRMGANFVIAVDISARPDGAATNNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNA
AILAGEEAVARIMPELQRKLAAARGVPVA

Sequences:

>Translated_349_residues
MCAPRPPAGAAPVARTLPRRRSRTYRRAGPMARRPAAGESSMSSPRLSRRQFTIACASASLAACTSFGGKSRSDSASSAT
QPHDKPVKIGIALGGGAARGFSHIGVLKALEARGIAIDLVAGTSAGSVVGALYASGMNGLQINKIALDMDQASISDWALP
FRSRGLLQGVALQNFLNKALNNRPIEKMPKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSVFEPVKIGSREYVDGG
LVSPVPASFARRMGANFVIAVDISARPDGAATNNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNA
AILAGEEAVARIMPELQRKLAAARGVPVA
>Mature_349_residues
MCAPRPPAGAAPVARTLPRRRSRTYRRAGPMARRPAAGESSMSSPRLSRRQFTIACASASLAACTSFGGKSRSDSASSAT
QPHDKPVKIGIALGGGAARGFSHIGVLKALEARGIAIDLVAGTSAGSVVGALYASGMNGLQINKIALDMDQASISDWALP
FRSRGLLQGVALQNFLNKALNNRPIEKMPKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSVFEPVKIGSREYVDGG
LVSPVPASFARRMGANFVIAVDISARPDGAATNNPIEMLLQTFTIMGQTIKTYELDKYADVVIRPNLAAMGGSDFNQRNA
AILAGEEAVARIMPELQRKLAAARGVPVA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656037, Length=233, Percent_Identity=33.0472103004292, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI260656043, Length=233, Percent_Identity=33.0472103004292, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI260656039, Length=233, Percent_Identity=33.0472103004292, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI260656041, Length=233, Percent_Identity=33.0472103004292, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI116256487, Length=233, Percent_Identity=33.0472103004292, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI148727335, Length=194, Percent_Identity=34.020618556701, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148727290, Length=194, Percent_Identity=34.020618556701, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI226510936, Length=298, Percent_Identity=34.5637583892617, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI193204778, Length=201, Percent_Identity=31.8407960199005, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=186, Percent_Identity=29.5698924731183, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281376913, Length=196, Percent_Identity=30.1020408163265, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571388, Length=193, Percent_Identity=30.0518134715026, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36535; Mature: 36535

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: PS01237 UPF0028

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAPRPPAGAAPVARTLPRRRSRTYRRAGPMARRPAAGESSMSSPRLSRRQFTIACASAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
LAACTSFGGKSRSDSASSATQPHDKPVKIGIALGGGAARGFSHIGVLKALEARGIAIDLV
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE
AGTSAGSVVGALYASGMNGLQINKIALDMDQASISDWALPFRSRGLLQGVALQNFLNKAL
ECCCCHHHHHHHHHCCCCCCEEEEEEEECCHHCHHHHCCCHHHCHHHHHHHHHHHHHHHH
NNRPIEKMPKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSVFEPVKIGSREYVDGG
CCCCHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCC
LVSPVPASFARRMGANFVIAVDISARPDGAATNNPIEMLLQTFTIMGQTIKTYELDKYAD
CCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCC
VVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARGVPVA
EEECCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCAPRPPAGAAPVARTLPRRRSRTYRRAGPMARRPAAGESSMSSPRLSRRQFTIACASAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
LAACTSFGGKSRSDSASSATQPHDKPVKIGIALGGGAARGFSHIGVLKALEARGIAIDLV
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE
AGTSAGSVVGALYASGMNGLQINKIALDMDQASISDWALPFRSRGLLQGVALQNFLNKAL
ECCCCHHHHHHHHHCCCCCCEEEEEEEECCHHCHHHHCCCHHHCHHHHHHHHHHHHHHHH
NNRPIEKMPKPLGIVATDLQSGQPILFQQGNTGLAVRASCSVPSVFEPVKIGSREYVDGG
CCCCHHHCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCC
LVSPVPASFARRMGANFVIAVDISARPDGAATNNPIEMLLQTFTIMGQTIKTYELDKYAD
CCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCC
VVIRPNLAAMGGSDFNQRNAAILAGEEAVARIMPELQRKLAAARGVPVA
EEECCCHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]