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The map label for this gene is yfjP [H]

Identifier: 161524377

GI number: 161524377

Start: 1320454

End: 1321335

Strand: Direct

Name: yfjP [H]

Synonym: Bmul_1204

Alternate gene names: 161524377

Gene position: 1320454-1321335 (Clockwise)

Preceding gene: 161524376

Following gene: 161524378

Centisome position: 38.29

GC content: 69.84

Gene sequence:

>882_bases
ATGGCAACGGCCAGAAAAGCGCCGGTCAGGCGCGCGACTCCGGTCGCCGCGCGTCCGGCAGCCAGACGCGCGCCGGCAGC
GAAGACCGACGCGGCGCGCGCCGTGCCGAACGGCGCGCTCAACGGTCATGTGCAGCCGGCGGCGAAGCACGCGCGTGCGA
AGGGCGCGGAACCCGCGCAGCCGGACCACGCGATGCAGGCGGTCGACGCGACGCGCAAGGCGCGCGCAGCCGATGCGGCG
GCCGACGGCGAGGATGACGTCGTCGTGCGTCCCGCATATTGGGACAAGGCGTGCGCCGATCTCGTCAAGCGCGACCGCAT
CCTCAAGAAGCTGATCCCGAAGTTCGGCCCCGCGCATCTGGTCAAGCGTGGCGATCCGTTCGTCACGCTCGCGCGCTCGG
TCGTCGGGCAGCAGATCTCGGTGCCGTCGGCGCAGTCGCTGTGGGCGCGCATCCAGGCCGCGTGCCCGAAGCTCGCGCCG
CAGCCGGTGATTCGGCTCGGGGCGGACAAGCTGATCGCGTGCGGGCTGTCGAAGCGCAAGACCGAATACATTCTGGATCT
CGCGCAGCACTTCGTGTCGGGTGCGCTGCACGTCGACAAATGGACGTCGATGGAAGACGAGGCCGTGATCGCGGAACTCA
CGCAGATCCGCGGGATCAGCCGCTGGACGGCCGAGATGTTCCTGATCTTCAACCTGTCGCGGCCGGACGTGCTGCCGCTC
GACGATCCGGGCCTGATCCGCGCGATCAGCGTCAATTACTTCAGCGGGGAGCCCGTCACGCGCAGCGAGGCGCGGGAAGT
CGCGGCGAACTGGGAGCCGTGGCGCACCGTGGCCACCTGGTATATGTGGCGCAGCCTCGACGCGCTCGATGCCGGCGCGT
GA

Upstream 100 bases:

>100_bases
GCCGGCGTCGCACTTGAAGACAAACCGGGCGGATCGACCGAATGGCGTCGCGTATGAGCGCGGTGCGTTCCACTGACCGA
TCCGTCGGGTAGGAGGCAGG

Downstream 100 bases:

>100_bases
TGGCGGCTATCGGATTTTAAACATCAATAGTTGAGAGCCGGTTTTGCGTGTCGGCCGCGCGGGTAGAATACGCGCTGCCG
CAAGACCCAAGGATTCGAAC

Product: HhH-GPD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MATARKAPVRRATPVAARPAARRAPAAKTDAARAVPNGALNGHVQPAAKHARAKGAEPAQPDHAMQAVDATRKARAADAA
ADGEDDVVVRPAYWDKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAACPKLAP
QPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTAEMFLIFNLSRPDVLPL
DDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDALDAGA

Sequences:

>Translated_293_residues
MATARKAPVRRATPVAARPAARRAPAAKTDAARAVPNGALNGHVQPAAKHARAKGAEPAQPDHAMQAVDATRKARAADAA
ADGEDDVVVRPAYWDKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAACPKLAP
QPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTAEMFLIFNLSRPDVLPL
DDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDALDAGA
>Mature_292_residues
ATARKAPVRRATPVAARPAARRAPAAKTDAARAVPNGALNGHVQPAAKHARAKGAEPAQPDHAMQAVDATRKARAADAAA
DGEDDVVVRPAYWDKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAACPKLAPQ
PVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLD
DPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDALDAGA

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320990, Length=197, Percent_Identity=31.4720812182741, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 31851; Mature: 31720

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATARKAPVRRATPVAARPAARRAPAAKTDAARAVPNGALNGHVQPAAKHARAKGAEPAQ
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
PDHAMQAVDATRKARAADAAADGEDDVVVRPAYWDKACADLVKRDRILKKLIPKFGPAHL
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKRGDPFVTLARSVVGQQISVPSAQSLWARIQAACPKLAPQPVIRLGADKLIACGLSKRK
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCHHH
TEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTAEMFLIFNLSRPDVLPL
HHHHHHHHHHHHHCCEEHHHCCCCCHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCCCC
DDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDALDAGA
CCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATARKAPVRRATPVAARPAARRAPAAKTDAARAVPNGALNGHVQPAAKHARAKGAEPAQ
CCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
PDHAMQAVDATRKARAADAAADGEDDVVVRPAYWDKACADLVKRDRILKKLIPKFGPAHL
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKRGDPFVTLARSVVGQQISVPSAQSLWARIQAACPKLAPQPVIRLGADKLIACGLSKRK
HHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHCCCHHH
TEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTAEMFLIFNLSRPDVLPL
HHHHHHHHHHHHHCCEEHHHCCCCCHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCCCC
DDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDALDAGA
CCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]