Click here to switch to the map view.

The map label for this gene is fixJ [H]

Identifier: 161524306

GI number: 161524306

Start: 1244123

End: 1244761

Strand: Reverse

Name: fixJ [H]

Synonym: Bmul_1131

Alternate gene names: 161524306

Gene position: 1244761-1244123 (Counterclockwise)

Preceding gene: 161524307

Following gene: 161524305

Centisome position: 36.1

GC content: 62.91

Gene sequence:

>639_bases
ATGAATAGTCCTGTCACCACCACCCAGGAAACCGTCTTTGTCGTCGACGACGACGAGGCCGTGCGGGACTCGCTGCGCTG
GCTGCTGGAGGCGAACGGCTATCGCGTGCAATGCTTCTCGAGCGCGGAGCAGTTTCTCGACGCGTATCAGCCCGCGCAGC
AGGCCGGCCAAATCGCGTGCCTGATCCTCGACGTGCGGATGTCGGGCATGAGCGGCCTCGAACTGCAGGAGCGTCTGATC
GCCGACAATGCCGCGCTGCCGATCATCTTCGTCACCGGTCACGGCGACGTGCCGATGGCCGTGTCGACGATGAAAAAGGG
TGCGATGGACTTTATCGAGAAACCGTTCGACGAAGCGGAACTGCGCAAGCTCGTCGAGCGGATGCTCGACAAGGCCCGAA
GCGAAAGCAAGAGCGTGCAGGAACAGCGCGCCGCGAGCGAGCGCCTGTCGAAGCTCACCGCGCGCGAACAGCAGGTGCTC
GAACGCATCATTGCCGGCCGCCTGAACAAGCAGATCGCCGACGATCTCGGGATCAGCATCAAGACGGTCGAAGCGCACCG
CGCGAACATCATGGAAAAGCTCAACGTCAACACAGTGGCCGACCTGCTGCGCCTCGCGCTGTCGAAGAAGCCCGCCTGA

Upstream 100 bases:

>100_bases
CCGGCGCGACGTTCCACTGCAGCCTGCCCATTGGGGAACCCGCTGATCTCGGCCAAGGGGGGTCCGAGACATCGGCATCA
CATACCGTTACGGGAGAACT

Downstream 100 bases:

>100_bases
GCACGCCACGCGCACGCCGGGCCGCGCGGCCCGGTGCGCCCGCTCCCCTTCCGCCCCGAGCGATACGGCCCTCTCGCTCG
GGGCGGCGTTGCTTGCGGCG

Product: two component LuxR family transcriptional regulator

Products: NADP; 2 glutathione [C]

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSPVTTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFLDAYQPAQQAGQIACLILDVRMSGMSGLELQERLI
ADNAALPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAELRKLVERMLDKARSESKSVQEQRAASERLSKLTAREQQVL
ERIIAGRLNKQIADDLGISIKTVEAHRANIMEKLNVNTVADLLRLALSKKPA

Sequences:

>Translated_212_residues
MNSPVTTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFLDAYQPAQQAGQIACLILDVRMSGMSGLELQERLI
ADNAALPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAELRKLVERMLDKARSESKSVQEQRAASERLSKLTAREQQVL
ERIIAGRLNKQIADDLGISIKTVEAHRANIMEKLNVNTVADLLRLALSKKPA
>Mature_212_residues
MNSPVTTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFLDAYQPAQQAGQIACLILDVRMSGMSGLELQERLI
ADNAALPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAELRKLVERMLDKARSESKSVQEQRAASERLSKLTAREQQVL
ERIIAGRLNKQIADDLGISIKTVEAHRANIMEKLNVNTVADLLRLALSKKPA

Specific function: FixJ, when activated by fixL, induces the expression of both nifA, required for activation of classical nif and fix genes, and fixK, required for fixN activation [H]

COG id: COG4566

COG function: function code T; Response regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790299, Length=161, Percent_Identity=33.5403726708075, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788222, Length=205, Percent_Identity=26.8292682926829, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790102, Length=196, Percent_Identity=33.6734693877551, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790860, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1786747, Length=152, Percent_Identity=26.9736842105263, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790437, Length=124, Percent_Identity=34.6774193548387, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=27.1186440677966, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23573; Mature: 23573

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPVTTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFLDAYQPAQQAGQIAC
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCEEE
LILDVRMSGMSGLELQERLIADNAALPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAE
EEEEEHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
LRKLVERMLDKARSESKSVQEQRAASERLSKLTAREQQVLERIIAGRLNKQIADDLGISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
KTVEAHRANIMEKLNVNTVADLLRLALSKKPA
EEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSPVTTTQETVFVVDDDEAVRDSLRWLLEANGYRVQCFSSAEQFLDAYQPAQQAGQIAC
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCEEE
LILDVRMSGMSGLELQERLIADNAALPIIFVTGHGDVPMAVSTMKKGAMDFIEKPFDEAE
EEEEEHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
LRKLVERMLDKARSESKSVQEQRAASERLSKLTAREQQVLERIIAGRLNKQIADDLGISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
KTVEAHRANIMEKLNVNTVADLLRLALSKKPA
EEHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADPH2; oxidized glutathione [C]

Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2000090; 12597275 [H]