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The map label for this gene is ydcO [H]

Identifier: 161524119

GI number: 161524119

Start: 1030417

End: 1031625

Strand: Reverse

Name: ydcO [H]

Synonym: Bmul_0943

Alternate gene names: 161524119

Gene position: 1031625-1030417 (Counterclockwise)

Preceding gene: 161524120

Following gene: 161524118

Centisome position: 29.92

GC content: 69.48

Gene sequence:

>1209_bases
ATGAACCCTTCGCCCACCGCGAGCGCGGGCCGCGCCGGCGGCCGCTTTTTGACCGATACGTCCGTCTCGGCACTCGTCGC
CGGCTTCGTCGCGATGATGACCGGCTATACGAGTTCGCTCGTGCTGATGTTCCAGGCCGGCCGCGCCGCGCACCTCAGCG
ACGCGCAGATCTCGTCGTGGATCTGGGCGCTGTCGATCGGCATGGCGCTGACGACGATCGGCCTGTCGCTGCGCTTTCGC
GCGCCGATCGTCGTCGCATGGTCGACGCCCGGCGCGGCGCTGCTGATCGCATCGCTGCCCGGCGTCCCGTACGCGGAGGC
GATCGGCGCGTTCGTCGTCTGCGCGCTGCTGCTGACGGCCGTCGGCGTGAGCGGGCTGTTCGACACGCTGATGCGACGCA
TTCCGTCCGGCATCGCGGCCGCGCTGCTCGCCGGCATCCTGTTCGAGATCGGCATCGAGATCTTCCGCGCGGCGCAATAC
CGCACCGCGCTCGTGCTCGCGATGTTCTTCACGTATCTGATCGTCAAGCGGCTCGCGCCGCGCTACGCGATCGTGACGAC
GCTGATCGTCGGCACGGCCGTGGCCGGCGCGCTCGGGCTGCTCGACTTCAGCCGGTTCCATATCGCGCTCGCGCAGCCGG
TGTTCACGATGCCCGCGTTCTCGATTGCGTCGATCGTCAGCATCGGCATTCCGCTGTTCGTCGTCGCGATGGCGTCGCAG
AACGTGCCGGGCATTGCGGTGCTGCGCGCGGACGGCTATCAGACGCCGTCGTCGCCGCTGATCGCGACGACCGGCCTCGC
GTCGCTGCTGCTCGCGCCGTTCGGCTCGCACGGTGTGAACCTCGCGGCGATCACGGCCGCGATCTGCACCGGCCCCGAGG
CGCACGAGGATCGCGCGAAGCGCTACACGGCCGCCGTGTGGTGCGGCACGTTCTACCTGATCGCGGGCATCTTCGGCGCG
ACGATCGCCGCGCTATTTGCGGCGCTGCCGAAGGCGCTCGTCGTGTCGGTCGCCGCGCTCGCGCTGTTCGGCTCGATCAT
GAGCGGGCTCGCGAATGCGATGCAGGACGTGAAGCAGCGCGAGGCCGCGCTCGTCACCTTCATGGTCACCGCGTCGGGCC
TCACGCTGCTGTCGATCGGCTCGGCGTTCTGGGGGCTCGTCGCCGGAATCGTCACGCAGGTGATCCTCAACGCGCGCCGC
GCGCCGTAA

Upstream 100 bases:

>100_bases
GCTCGCGGGGCTCGAAACCGCGATGCGCGCACTGAGCAAGTAACGCATCCCCAACCAGCAGATACGAGGCCGCCGTCGAG
CGGCCCGTTCCGGAGATAGC

Downstream 100 bases:

>100_bases
CGCGTCGCCGCGTAGGCGCGATGCGCGAAAAGGTGCTCGACACGAATCGGGCCTAAAATAGTGGATCGAAGGCGGCGCAT
GGCGCCGCCTCGCTTCGCCG

Product: benzoate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNPSPTASAGRAGGRFLTDTSVSALVAGFVAMMTGYTSSLVLMFQAGRAAHLSDAQISSWIWALSIGMALTTIGLSLRFR
APIVVAWSTPGAALLIASLPGVPYAEAIGAFVVCALLLTAVGVSGLFDTLMRRIPSGIAAALLAGILFEIGIEIFRAAQY
RTALVLAMFFTYLIVKRLAPRYAIVTTLIVGTAVAGALGLLDFSRFHIALAQPVFTMPAFSIASIVSIGIPLFVVAMASQ
NVPGIAVLRADGYQTPSSPLIATTGLASLLLAPFGSHGVNLAAITAAICTGPEAHEDRAKRYTAAVWCGTFYLIAGIFGA
TIAALFAALPKALVVSVAALALFGSIMSGLANAMQDVKQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTQVILNARR
AP

Sequences:

>Translated_402_residues
MNPSPTASAGRAGGRFLTDTSVSALVAGFVAMMTGYTSSLVLMFQAGRAAHLSDAQISSWIWALSIGMALTTIGLSLRFR
APIVVAWSTPGAALLIASLPGVPYAEAIGAFVVCALLLTAVGVSGLFDTLMRRIPSGIAAALLAGILFEIGIEIFRAAQY
RTALVLAMFFTYLIVKRLAPRYAIVTTLIVGTAVAGALGLLDFSRFHIALAQPVFTMPAFSIASIVSIGIPLFVVAMASQ
NVPGIAVLRADGYQTPSSPLIATTGLASLLLAPFGSHGVNLAAITAAICTGPEAHEDRAKRYTAAVWCGTFYLIAGIFGA
TIAALFAALPKALVVSVAALALFGSIMSGLANAMQDVKQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTQVILNARR
AP
>Mature_402_residues
MNPSPTASAGRAGGRFLTDTSVSALVAGFVAMMTGYTSSLVLMFQAGRAAHLSDAQISSWIWALSIGMALTTIGLSLRFR
APIVVAWSTPGAALLIASLPGVPYAEAIGAFVVCALLLTAVGVSGLFDTLMRRIPSGIAAALLAGILFEIGIEIFRAAQY
RTALVLAMFFTYLIVKRLAPRYAIVTTLIVGTAVAGALGLLDFSRFHIALAQPVFTMPAFSIASIVSIGIPLFVVAMASQ
NVPGIAVLRADGYQTPSSPLIATTGLASLLLAPFGSHGVNLAAITAAICTGPEAHEDRAKRYTAAVWCGTFYLIAGIFGA
TIAALFAALPKALVVSVAALALFGSIMSGLANAMQDVKQREAALVTFMVTASGLTLLSIGSAFWGLVAGIVTQVILNARR
AP

Specific function: Unknown

COG id: COG3135

COG function: function code Q; Uncharacterized protein involved in benzoate metabolism

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081909, Length=373, Percent_Identity=46.6487935656836, Blast_Score=322, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004711 [H]

Pfam domain/function: PF03594 BenE [H]

EC number: NA

Molecular weight: Translated: 41481; Mature: 41481

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSPTASAGRAGGRFLTDTSVSALVAGFVAMMTGYTSSLVLMFQAGRAAHLSDAQISSW
CCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCHHHHHHH
IWALSIGMALTTIGLSLRFRAPIVVAWSTPGAALLIASLPGVPYAEAIGAFVVCALLLTA
HHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
VGVSGLFDTLMRRIPSGIAAALLAGILFEIGIEIFRAAQYRTALVLAMFFTYLIVKRLAP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYAIVTTLIVGTAVAGALGLLDFSRFHIALAQPVFTMPAFSIASIVSIGIPLFVVAMASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
NVPGIAVLRADGYQTPSSPLIATTGLASLLLAPFGSHGVNLAAITAAICTGPEAHEDRAK
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
RYTAAVWCGTFYLIAGIFGATIAALFAALPKALVVSVAALALFGSIMSGLANAMQDVKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAALVTFMVTASGLTLLSIGSAFWGLVAGIVTQVILNARRAP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPSPTASAGRAGGRFLTDTSVSALVAGFVAMMTGYTSSLVLMFQAGRAAHLSDAQISSW
CCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCHHHHHHH
IWALSIGMALTTIGLSLRFRAPIVVAWSTPGAALLIASLPGVPYAEAIGAFVVCALLLTA
HHHHHHHHHHHHHHHHEEECCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
VGVSGLFDTLMRRIPSGIAAALLAGILFEIGIEIFRAAQYRTALVLAMFFTYLIVKRLAP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYAIVTTLIVGTAVAGALGLLDFSRFHIALAQPVFTMPAFSIASIVSIGIPLFVVAMASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
NVPGIAVLRADGYQTPSSPLIATTGLASLLLAPFGSHGVNLAAITAAICTGPEAHEDRAK
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH
RYTAAVWCGTFYLIAGIFGATIAALFAALPKALVVSVAALALFGSIMSGLANAMQDVKQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAALVTFMVTASGLTLLSIGSAFWGLVAGIVTQVILNARRAP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]