| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is uup-A [H]
Identifier: 161524094
GI number: 161524094
Start: 1001753
End: 1003819
Strand: Direct
Name: uup-A [H]
Synonym: Bmul_0918
Alternate gene names: 161524094
Gene position: 1001753-1003819 (Clockwise)
Preceding gene: 161524093
Following gene: 161524095
Centisome position: 29.05
GC content: 67.2
Gene sequence:
>2067_bases ATGCGCGTCGCTTCGCCGCGGCGTGCTCCGCCGCGGCACTCGTCCATCCGGCCATACGGTTGGCGACGCGCGCCACCGGT ACAATGGGCGCTTCCGATTTCTCTTCGCCGTTTCCCCATGTCGCTTTATTCCATTACCGGCGCGCAACTCGCGTTCGGTC ACGTCGCGTTGCTCGATCACGCGGATTTCTCGCTGGAAGCCGGCGAGCGCGTCGGTCTGATCGGCCGCAACGGCGCGGGC AAGTCGTCGCTGCTGAAGATCGTCGCGGGCCTCGCGAAGCCCGATGACGGTCTCGTCACGCGGCAGCAGGAACTCGTGAC GGTCTACGTGCCGCAGGAGCCGGAGTTCGAGCCCGGCGCGACGGTGTTCGACGCGGTCGCATCGGGGCTCACGCATACGC GCGAACTGCTCGACGAATACGACGCGATCGCGCATCGCCTCGCCGAGACGCCCGAAGGCGCCGAGCACGATGCGCTGCTC GCGCGGATGAACGCGCTGCAGTCGTCGCTCGATGCGCACGACGCGTGGAACTGGCGCACGCGCGTGTCGATGACGCTCGC GCAGATCGGGCTGCAGGACGGCGACGCGCGCGTCGAAGCGCTGTCGGGCGGCATGCAGAAGCGCGTCGCGCTCGCGCGTG CGCTGGTGCTGCAGCCGGACGTGCTGCTGCTCGACGAACCGACGAACCACCTCGACTTCGACGGTATCCGCTGGCTCGAA GACCTGTTGGTCGCGCAGCGCGCGGGCCTGCTGTTCATCACGCACGATCGCGCGTTCCTCGATCGCGTCGCGACGCGCAT CGTCGAACTCGATCGCGGCCGCTTGCTGTCGTATCCGGGCAATTTCTCCGCGTATCAGACGCGCAAGGCGCAGCAGCTCG AAGTCGAGCGCGTCGAGAACGAGAAATTCGACAAGCTGCTCGCGCAGGAAGAAGTGTGGATCCGCAAGGGCGTCGAGGCG CGTCGCACGCGCAGCGTCGGCCGCATCGCGCGGCTCGAGCAGATGCGCCGCGAGCGTGCGGAGCGCCGCAACGCGCAGGG CAACGTGAAGCTCGACGTCGCGCAGGGCGAGAAGTCCGGCAAGATCGTCGCGGAGCTGACCGACGTGACGAAGCGCTATG GCGGCCGCACGATCGTCGACCGCTTCACGGCGACGGTGATGCGCGGCGACAAGATCGGCTTCGTCGGCCCGAACGGCGCG GGGAAAACCACGCTGCTCAAGCTGATCCTCGGCGAACTGAAGCCCGACGAAGGCACGGTGCGCACGGGCACCAACCTGCA GGTCGCCTATTTCGACCAGATGCGGGCGCAGCTCGATCAGGAGAAGAGCCTCGCGGATACGATCAGCCCGGGCAGCGAGT GGGTCGAGATCGGCGGCGTGCGCAAGCACGTGATGAGCTATCTCGGCGACTTCCTGTTCGCGCCGGAGCGCGCGCGTTCA CCGGTCAAGTCGCTGTCGGGCGGCGAGCGCAACCGTCTGCTGCTCGCACGCCTGTTCGCGCGTCCGGCCAACGTGCTGGT GCTCGACGAACCGACCAACGACCTCGACATCCCGACGCTCGAACTGCTGGAAGAACTGCTGACGGATTACGACGGCACCG TGCTGCTCGTCAGCCACGATCGCGCGTTTCTCGACAACGTAGTGACGTCGGTGATCGCGTCCGAAGGCGATGGCAAGTGG CGCGAGTACGTCGGCGGCTTCACCGACTGGCAGATCCAGAGCGAGCGCGCCGAACAACTCGCGCAGCAGGAAGCCGCGAA GCGCGCGGTCAAGGAAGCGGCGCCGGTCAAGGAAGAGCCGGCGAAAAGCGCGGCGGGCCGCAACGCACAGCGCACGGTGA AGCTGTCGTTCAACGAGCAGCGCGAACTCGATGCGCTGCCGGAGAAGATCGCCGCACTCGAGGCCGAGCAAAAGACGATC GGCGCGCAGCTCGAGGACGGTTCGATCTTCGCGAAGGATCCGCAGGAAGGCGCGCGCCTCACCGAGCGGTTCGCGGCGAT CGACGACGAACTGCTCGCGGCGCTCGAACGCTGGGAAACGCTCGAAGCGAAACGCAAGCCGGTATGA
Upstream 100 bases:
>100_bases ACGCTCCAGCTCGGCGACGGCGCGCACCGCTCGTACGGTCCCGAATTGAGCTCGACGATCACCGTCAACGTGAAGTGACC GCCATTGCGCGGCGCGCGCG
Downstream 100 bases:
>100_bases CGCGCGGCGCGCGTCGGCAGCGTGCGGCTCGCGCGAGCGGCCGGCGTGCCGGCGCCGCGCGCGCCATATCGCGACGGCGC GCGACGGCGCGCGACGCGGA
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MRVASPRRAPPRHSSIRPYGWRRAPPVQWALPISLRRFPMSLYSITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAG KSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGATVFDAVASGLTHTRELLDEYDAIAHRLAETPEGAEHDALL ARMNALQSSLDAHDAWNWRTRVSMTLAQIGLQDGDARVEALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLE DLLVAQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPGNFSAYQTRKAQQLEVERVENEKFDKLLAQEEVWIRKGVEA RRTRSVGRIARLEQMRRERAERRNAQGNVKLDVAQGEKSGKIVAELTDVTKRYGGRTIVDRFTATVMRGDKIGFVGPNGA GKTTLLKLILGELKPDEGTVRTGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARS PVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTLELLEELLTDYDGTVLLVSHDRAFLDNVVTSVIASEGDGKW REYVGGFTDWQIQSERAEQLAQQEAAKRAVKEAAPVKEEPAKSAAGRNAQRTVKLSFNEQRELDALPEKIAALEAEQKTI GAQLEDGSIFAKDPQEGARLTERFAAIDDELLAALERWETLEAKRKPV
Sequences:
>Translated_688_residues MRVASPRRAPPRHSSIRPYGWRRAPPVQWALPISLRRFPMSLYSITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAG KSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGATVFDAVASGLTHTRELLDEYDAIAHRLAETPEGAEHDALL ARMNALQSSLDAHDAWNWRTRVSMTLAQIGLQDGDARVEALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLE DLLVAQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPGNFSAYQTRKAQQLEVERVENEKFDKLLAQEEVWIRKGVEA RRTRSVGRIARLEQMRRERAERRNAQGNVKLDVAQGEKSGKIVAELTDVTKRYGGRTIVDRFTATVMRGDKIGFVGPNGA GKTTLLKLILGELKPDEGTVRTGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARS PVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTLELLEELLTDYDGTVLLVSHDRAFLDNVVTSVIASEGDGKW REYVGGFTDWQIQSERAEQLAQQEAAKRAVKEAAPVKEEPAKSAAGRNAQRTVKLSFNEQRELDALPEKIAALEAEQKTI GAQLEDGSIFAKDPQEGARLTERFAAIDDELLAALERWETLEAKRKPV >Mature_688_residues MRVASPRRAPPRHSSIRPYGWRRAPPVQWALPISLRRFPMSLYSITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAG KSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGATVFDAVASGLTHTRELLDEYDAIAHRLAETPEGAEHDALL ARMNALQSSLDAHDAWNWRTRVSMTLAQIGLQDGDARVEALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLE DLLVAQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPGNFSAYQTRKAQQLEVERVENEKFDKLLAQEEVWIRKGVEA RRTRSVGRIARLEQMRRERAERRNAQGNVKLDVAQGEKSGKIVAELTDVTKRYGGRTIVDRFTATVMRGDKIGFVGPNGA GKTTLLKLILGELKPDEGTVRTGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARS PVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTLELLEELLTDYDGTVLLVSHDRAFLDNVVTSVIASEGDGKW REYVGGFTDWQIQSERAEQLAQQEAAKRAVKEAAPVKEEPAKSAAGRNAQRTVKLSFNEQRELDALPEKIAALEAEQKTI GAQLEDGSIFAKDPQEGARLTERFAAIDDELLAALERWETLEAKRKPV
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=541, Percent_Identity=32.902033271719, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=31.0861423220974, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=31.1195445920304, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=30.1318267419962, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=30.1318267419962, Blast_Score=183, Evalue=4e-46, Organism=Escherichia coli, GI1787182, Length=644, Percent_Identity=47.6708074534161, Blast_Score=544, Evalue=1e-156, Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=36.852207293666, Blast_Score=351, Evalue=1e-97, Organism=Escherichia coli, GI1787041, Length=515, Percent_Identity=32.2330097087379, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1789751, Length=608, Percent_Identity=31.25, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=32.4468085106383, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789891, Length=255, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI48995001, Length=536, Percent_Identity=25.9328358208955, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI87081709, Length=230, Percent_Identity=28.695652173913, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787370, Length=249, Percent_Identity=28.5140562248996, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=26.1224489795918, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1787792, Length=514, Percent_Identity=23.5408560311284, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=27.5303643724696, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=32.4200913242009, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790544, Length=265, Percent_Identity=29.0566037735849, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=25, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=27.5109170305677, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788506, Length=237, Percent_Identity=28.2700421940928, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1787164, Length=232, Percent_Identity=28.8793103448276, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786345, Length=197, Percent_Identity=32.48730964467, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI48994883, Length=240, Percent_Identity=25, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17559834, Length=581, Percent_Identity=29.2598967297762, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17553372, Length=516, Percent_Identity=33.3333333333333, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=28.8679245283019, Blast_Score=182, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6320874, Length=542, Percent_Identity=28.7822878228782, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=29.7047970479705, Blast_Score=184, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6325030, Length=398, Percent_Identity=29.1457286432161, Blast_Score=144, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6324314, Length=400, Percent_Identity=28, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323278, Length=400, Percent_Identity=27, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI24666836, Length=544, Percent_Identity=31.9852941176471, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI24642252, Length=544, Percent_Identity=30.3308823529412, Blast_Score=209, Evalue=8e-54, Organism=Drosophila melanogaster, GI18859989, Length=544, Percent_Identity=30.3308823529412, Blast_Score=209, Evalue=8e-54, Organism=Drosophila melanogaster, GI24641342, Length=534, Percent_Identity=29.0262172284644, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 76450; Mature: 76450
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVASPRRAPPRHSSIRPYGWRRAPPVQWALPISLRRFPMSLYSITGAQLAFGHVALLDH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHEEEEEC ADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGA CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCCH TVFDAVASGLTHTRELLDEYDAIAHRLAETPEGAEHDALLARMNALQSSLDAHDAWNWRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH RVSMTLAQIGLQDGDARVEALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLE HHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH DLLVAQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPGNFSAYQTRKAQQLEVERVEN HHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHH EKFDKLLAQEEVWIRKGVEARRTRSVGRIARLEQMRRERAERRNAQGNVKLDVAQGEKSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC KIVAELTDVTKRYGGRTIVDRFTATVMRGDKIGFVGPNGAGKTTLLKLILGELKPDEGTV CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCE RTGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARS ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC PVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTLELLEELLTDYDGTVLLVSHD HHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECC RAFLDNVVTSVIASEGDGKWREYVGGFTDWQIQSERAEQLAQQEAAKRAVKEAAPVKEEP HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCC AKSAAGRNAQRTVKLSFNEQRELDALPEKIAALEAEQKTIGAQLEDGSIFAKDPQEGARL HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCHHHHHH TERFAAIDDELLAALERWETLEAKRKPV HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRVASPRRAPPRHSSIRPYGWRRAPPVQWALPISLRRFPMSLYSITGAQLAFGHVALLDH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHEEEEEC ADFSLEAGERVGLIGRNGAGKSSLLKIVAGLAKPDDGLVTRQQELVTVYVPQEPEFEPGA CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCCH TVFDAVASGLTHTRELLDEYDAIAHRLAETPEGAEHDALLARMNALQSSLDAHDAWNWRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH RVSMTLAQIGLQDGDARVEALSGGMQKRVALARALVLQPDVLLLDEPTNHLDFDGIRWLE HHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH DLLVAQRAGLLFITHDRAFLDRVATRIVELDRGRLLSYPGNFSAYQTRKAQQLEVERVEN HHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHH EKFDKLLAQEEVWIRKGVEARRTRSVGRIARLEQMRRERAERRNAQGNVKLDVAQGEKSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC KIVAELTDVTKRYGGRTIVDRFTATVMRGDKIGFVGPNGAGKTTLLKLILGELKPDEGTV CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCE RTGTNLQVAYFDQMRAQLDQEKSLADTISPGSEWVEIGGVRKHVMSYLGDFLFAPERARS ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCC PVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPTLELLEELLTDYDGTVLLVSHD HHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECC RAFLDNVVTSVIASEGDGKWREYVGGFTDWQIQSERAEQLAQQEAAKRAVKEAAPVKEEP HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCC AKSAAGRNAQRTVKLSFNEQRELDALPEKIAALEAEQKTIGAQLEDGSIFAKDPQEGARL HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCHHHHHH TERFAAIDDELLAALERWETLEAKRKPV HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Endonuclease; Excision [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]