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The map label for this gene is nahR [H]

Identifier: 161524060

GI number: 161524060

Start: 967263

End: 968183

Strand: Reverse

Name: nahR [H]

Synonym: Bmul_0881

Alternate gene names: 161524060

Gene position: 968183-967263 (Counterclockwise)

Preceding gene: 161524062

Following gene: 161524059

Centisome position: 28.08

GC content: 70.68

Gene sequence:

>921_bases
ATGCATCCCGATCTGCGCCGTCTCGACCTGAACCTGCTGCTCGTCTTCGACGCGCTGTACCGCCACCGCTCGGTGGCCGC
GGCCGCGCACGAGCTCGCGATGAGTCCGTCCGCGCTGAGCCACGCGCTCGCGCGGCTGCGCGACGCGATCGGCGACGCGC
TGTTCGTGCGCCTCGGCAACGAGATGCAGCCGACCGTGCGCGCGGACGACATCGCGACCTGGGCCGGCGACGCGCTCGAC
GCGATGTCGAAAGGCCTCGCGCGGGCGCAGCGCTTCGATCCCGCGCACAGCGACCGCACCTTCGTGTTCGCGGCGACCGA
CTACACGGCGTTCGCGGTGCTGCCGGCCTTCGTCGCGCAGATCCAGGAGGCGGCACCGCGACTGCGGATCCGCGTCGTCC
ATTCCGACCGGAAGATCGCCGTCGACGAACTGGCCGCCGGCCGTATCGATTTCGCGCTCGGCTATCACGAGGAAGCGGTC
GCCGATGCGCCGGGCATCGAGGACTTCGACTGGTTCTCGGACGACTATGTCGTGATCGCGAGTGCCGCCCACCCGACGAT
CCGCCGACGCCTGACGCTCGACCAGTATCTGGCGGCGCGCCACGTGGTCGTCACGCCGTGGAACGAATCGCGCGGCGTGA
TCGATTACGTGCTGGACCGGCTCGGCGTCGCGCGCGACGTCGCGGTGCAACTGCCGACCGTGCTGGCCGCGCCGTTCGTG
ATCGCGCAATCCGCGCTGCTGATGACGGTGCCGAACCGCGCCGCGCAGACGCTGCGGCACGCGGCGCCGATCCGCCTCTT
TCCCGCGCCGTTCGAGATTCCGCGCTACACGCTGAAGGTCTACTCGCACGCGAAGCACGCACGCACCGACGCGCACCGCT
GGATTCGCGCGCGCCTGCTGGACGCGCGGCCGTACGCGTAG

Upstream 100 bases:

>100_bases
GAAACAGCGCCGCGATTCGCGCTGGCGCTCGTCGAACCGACATGCTACGTTCGCGTCGCGCCTGCAGGAAGTGCAGTTTT
TTCATTCCGATCTGAACGCC

Downstream 100 bases:

>100_bases
CGCGCCGTACGAAGCGCCGCGCGGCATTGTTGCGGGCACGCGCCGGCCCGGCCCATGGCCGCCGAAATCATTACGAATTA
CTTACCAATCGTGCGCTTTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MHPDLRRLDLNLLLVFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATWAGDALD
AMSKGLARAQRFDPAHSDRTFVFAATDYTAFAVLPAFVAQIQEAAPRLRIRVVHSDRKIAVDELAAGRIDFALGYHEEAV
ADAPGIEDFDWFSDDYVVIASAAHPTIRRRLTLDQYLAARHVVVTPWNESRGVIDYVLDRLGVARDVAVQLPTVLAAPFV
IAQSALLMTVPNRAAQTLRHAAPIRLFPAPFEIPRYTLKVYSHAKHARTDAHRWIRARLLDARPYA

Sequences:

>Translated_306_residues
MHPDLRRLDLNLLLVFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATWAGDALD
AMSKGLARAQRFDPAHSDRTFVFAATDYTAFAVLPAFVAQIQEAAPRLRIRVVHSDRKIAVDELAAGRIDFALGYHEEAV
ADAPGIEDFDWFSDDYVVIASAAHPTIRRRLTLDQYLAARHVVVTPWNESRGVIDYVLDRLGVARDVAVQLPTVLAAPFV
IAQSALLMTVPNRAAQTLRHAAPIRLFPAPFEIPRYTLKVYSHAKHARTDAHRWIRARLLDARPYA
>Mature_306_residues
MHPDLRRLDLNLLLVFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATWAGDALD
AMSKGLARAQRFDPAHSDRTFVFAATDYTAFAVLPAFVAQIQEAAPRLRIRVVHSDRKIAVDELAAGRIDFALGYHEEAV
ADAPGIEDFDWFSDDYVVIASAAHPTIRRRLTLDQYLAARHVVVTPWNESRGVIDYVLDRLGVARDVAVQLPTVLAAPFV
IAQSALLMTVPNRAAQTLRHAAPIRLFPAPFEIPRYTLKVYSHAKHARTDAHRWIRARLLDARPYA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=308, Percent_Identity=26.6233766233766, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI87081766, Length=269, Percent_Identity=24.907063197026, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790147, Length=271, Percent_Identity=28.0442804428044, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786820, Length=310, Percent_Identity=22.9032258064516, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34031; Mature: 34031

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPDLRRLDLNLLLVFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHCCC
EMQPTVRADDIATWAGDALDAMSKGLARAQRFDPAHSDRTFVFAATDYTAFAVLPAFVAQ
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
IQEAAPRLRIRVVHSDRKIAVDELAAGRIDFALGYHEEAVADAPGIEDFDWFSDDYVVIA
HHHCCCCEEEEEEECCCCEEHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEE
SAAHPTIRRRLTLDQYLAARHVVVTPWNESRGVIDYVLDRLGVARDVAVQLPTVLAAPFV
ECCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IAQSALLMTVPNRAAQTLRHAAPIRLFPAPFEIPRYTLKVYSHAKHARTDAHRWIRARLL
HHCCHHEEECCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DARPYA
CCCCCC
>Mature Secondary Structure
MHPDLRRLDLNLLLVFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHCCC
EMQPTVRADDIATWAGDALDAMSKGLARAQRFDPAHSDRTFVFAATDYTAFAVLPAFVAQ
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
IQEAAPRLRIRVVHSDRKIAVDELAAGRIDFALGYHEEAVADAPGIEDFDWFSDDYVVIA
HHHCCCCEEEEEEECCCCEEHHHHHCCCEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEE
SAAHPTIRRRLTLDQYLAARHVVVTPWNESRGVIDYVLDRLGVARDVAVQLPTVLAAPFV
ECCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IAQSALLMTVPNRAAQTLRHAAPIRLFPAPFEIPRYTLKVYSHAKHARTDAHRWIRARLL
HHCCHHEEECCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DARPYA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]