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The map label for this gene is yhbQ [C]

Identifier: 161524055

GI number: 161524055

Start: 961087

End: 961800

Strand: Reverse

Name: yhbQ [C]

Synonym: Bmul_0876

Alternate gene names: 161524055

Gene position: 961800-961087 (Counterclockwise)

Preceding gene: 161524056

Following gene: 161524053

Centisome position: 27.89

GC content: 69.19

Gene sequence:

>714_bases
ATGTCCTGGTTTCTGTATCTGATCGAATGCGTCGACGACAGCGTCTACACGGGCATCACGACCGACGTCGCCGCACGCTT
CGACGAACACGCGGCCGGCAAGGGCGCGCGCTACACGCGCTCGCGCAAGCCGCGCGCCGTGCTCGCGTCGTTTCCGTTGC
CCGACCGATCGATCGCGTCGAAGGCCGAGTACTGGGTGAAACGGCTGACGGCCGCGCAAAAGCGCGAGCTGGCCGCAGGT
ATCCGGACGCTGGCGTCGGTCTTGCCGGCCGCGCTGTTCGCCGTCGAAGACGAAGCGGAGCGCGTGGCGGCCGGGCAGCC
TGCGCGTACGGGCGGCGGCCGGCGACGTGGCGCGAAAGCATCGGCCGCCGTGGAGGAATCAGCCGAGGCGAGCGGGCCGT
CGAAGGCCGTACGCGCAGCGACGCGCGCGAAGAAGGCCGCGGGAGCCGACACGCCTGTCCCGGCCATCCGCAGCGCGAAA
GCGCCGCAGGTCGAGAAGGCGACGAAGACGAAAAAGACGGCCAAACCGACGAACGTACCGGCGCAGGCGCCTGCACGCGC
CGAAAAAGGCACAAAGCCGGCGAAAGCGGAACAACCGGCAAAAGCACCCAAAGCCCCCAAGGCCCCCAAACCGAAGCGCC
CGCCATCCGCCCGCCCCATCGCCGCCGCACCACGCAAAACCGTCCGCACAAAACAAAACCGCGCGGCCTCGTGA

Upstream 100 bases:

>100_bases
CGCGCCGCGTTCGCGCCGTTCGCCGCAATCGGCCGCGATCAACCGCGATCGCGCACGCCATTTCTGAGACACTTGCGGTT
CCGCATTCCGACGATGGGTC

Downstream 100 bases:

>100_bases
CGAGACTCGCGCGGTTTGCCTGCACCGCGAACCGGCCGCCGGGCCGGCGCGCCGCTTACTTCTTGTAGTTCGCGACGCCG
TCGGTGATTTCCTTGTGCGC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSWFLYLIECVDDSVYTGITTDVAARFDEHAAGKGARYTRSRKPRAVLASFPLPDRSIASKAEYWVKRLTAAQKRELAAG
IRTLASVLPAALFAVEDEAERVAAGQPARTGGGRRRGAKASAAVEESAEASGPSKAVRAATRAKKAAGADTPVPAIRSAK
APQVEKATKTKKTAKPTNVPAQAPARAEKGTKPAKAEQPAKAPKAPKAPKPKRPPSARPIAAAPRKTVRTKQNRAAS

Sequences:

>Translated_237_residues
MSWFLYLIECVDDSVYTGITTDVAARFDEHAAGKGARYTRSRKPRAVLASFPLPDRSIASKAEYWVKRLTAAQKRELAAG
IRTLASVLPAALFAVEDEAERVAAGQPARTGGGRRRGAKASAAVEESAEASGPSKAVRAATRAKKAAGADTPVPAIRSAK
APQVEKATKTKKTAKPTNVPAQAPARAEKGTKPAKAEQPAKAPKAPKAPKPKRPPSARPIAAAPRKTVRTKQNRAAS
>Mature_236_residues
SWFLYLIECVDDSVYTGITTDVAARFDEHAAGKGARYTRSRKPRAVLASFPLPDRSIASKAEYWVKRLTAAQKRELAAGI
RTLASVLPAALFAVEDEAERVAAGQPARTGGGRRRGAKASAAVEESAEASGPSKAVRAATRAKKAAGADTPVPAIRSAKA
PQVEKATKTKKTAKPTNVPAQAPARAEKGTKPAKAEQPAKAPKAPKAPKPKRPPSARPIAAAPRKTVRTKQNRAAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=50.6493506493506, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 24934; Mature: 24802

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFLYLIECVDDSVYTGITTDVAARFDEHAAGKGARYTRSRKPRAVLASFPLPDRSIAS
CHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHHHH
KAEYWVKRLTAAQKRELAAGIRTLASVLPAALFAVEDEAERVAAGQPARTGGGRRRGAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SAAVEESAEASGPSKAVRAATRAKKAAGADTPVPAIRSAKAPQVEKATKTKKTAKPTNVP
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCC
AQAPARAEKGTKPAKAEQPAKAPKAPKAPKPKRPPSARPIAAAPRKTVRTKQNRAAS
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SWFLYLIECVDDSVYTGITTDVAARFDEHAAGKGARYTRSRKPRAVLASFPLPDRSIAS
HHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCCHHHHH
KAEYWVKRLTAAQKRELAAGIRTLASVLPAALFAVEDEAERVAAGQPARTGGGRRRGAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SAAVEESAEASGPSKAVRAATRAKKAAGADTPVPAIRSAKAPQVEKATKTKKTAKPTNVP
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCC
AQAPARAEKGTKPAKAEQPAKAPKAPKAPKPKRPPSARPIAAAPRKTVRTKQNRAAS
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA