Click here to switch to the map view.

The map label for this gene is yafE [H]

Identifier: 161524046

GI number: 161524046

Start: 948081

End: 948833

Strand: Direct

Name: yafE [H]

Synonym: Bmul_0867

Alternate gene names: 161524046

Gene position: 948081-948833 (Clockwise)

Preceding gene: 161524042

Following gene: 161524048

Centisome position: 27.49

GC content: 70.92

Gene sequence:

>753_bases
ATGAAACACCACGATCAGGTCGCCGACGCATTCGGCTCGACGGCCGCCGCCTATCTGACGAGCACCGTTCATGCGACGGG
CGCCGATCTGCAGACGCTCGCCGATACGGTGCGCGCGACGCCCGACGCGGCCGTGCTCGATCTCGGCTGCGGCGCGGGCC
ACGCGAGCTTCGCGGTCGCGCCGCACGTGCGCGAGGTCGTCGCCTACGATCTCGCCGCGCCGATGCTCGCGACCGTCGAT
GCGGCCGCGCGCGAGCGCAGGCTCGCGAACGTTCGCACGCAGCAGGGGCCAGCCGAGCGTCTGCCGTTCGACGCGGCGAC
CTTCGACTGGGTCGTCAGCCGGATGAGCGCGCATCACTGGCACGACGTGCGCGCGGCGCTCGCCGAAGTGCGCCGCGTGC
TGAAGCCGGGCGGACGCGTGCTGATGATCGACATCGCCGGCAACGATCACCCGCTGCTCGACACGTATCTGCAGGCCGCC
GAAGTGCTGCGCGACGCGTCGCACGTGCGCGACTATCGCGCCGACGAGTGGCTCGCGATGTTCCGCGACGCGGGCTTCGA
GGCGCACGTGAAGCGCCGCTGGCGGCTGCCGATCGATTTCGATACGTGGGTTGCGCGGATCCGCACGCCGGCCGACAGCG
TGACCGGCATTCGCGCGCTCTGGGCCCACGCGCCGGACGAAGTGCGCGCGTACTACGCGGTGCAGGCCGACGGATCGTTC
GAACACGACGCGCTGCTGATCGACGCGCATTGA

Upstream 100 bases:

>100_bases
CAGAATAACTGCTTGACTTGTACTGGTACAAACGCCGCCCTATTGTAGCGATTCGCGCGCTGCGAGTCAGCGCCCGTCCC
GCCCACGACAGGAGTGCACG

Downstream 100 bases:

>100_bases
ACGCGCGCGGCGTGTCGACGCCCGGCGTATCGACGCCCGGCGTATCGACGCCCGGCGCATCGACGCGCCGCGCATGAAAA
AGGCCGCGACACGCGCGTTC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKHHDQVADAFGSTAAAYLTSTVHATGADLQTLADTVRATPDAAVLDLGCGAGHASFAVAPHVREVVAYDLAAPMLATVD
AAARERRLANVRTQQGPAERLPFDAATFDWVVSRMSAHHWHDVRAALAEVRRVLKPGGRVLMIDIAGNDHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFEAHVKRRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRAYYAVQADGSF
EHDALLIDAH

Sequences:

>Translated_250_residues
MKHHDQVADAFGSTAAAYLTSTVHATGADLQTLADTVRATPDAAVLDLGCGAGHASFAVAPHVREVVAYDLAAPMLATVD
AAARERRLANVRTQQGPAERLPFDAATFDWVVSRMSAHHWHDVRAALAEVRRVLKPGGRVLMIDIAGNDHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFEAHVKRRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRAYYAVQADGSF
EHDALLIDAH
>Mature_250_residues
MKHHDQVADAFGSTAAAYLTSTVHATGADLQTLADTVRATPDAAVLDLGCGAGHASFAVAPHVREVVAYDLAAPMLATVD
AAARERRLANVRTQQGPAERLPFDAATFDWVVSRMSAHHWHDVRAALAEVRRVLKPGGRVLMIDIAGNDHPLLDTYLQAA
EVLRDASHVRDYRADEWLAMFRDAGFEAHVKRRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRAYYAVQADGSF
EHDALLIDAH

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=202, Percent_Identity=49.009900990099, Blast_Score=197, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27499; Mature: 27499

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHHDQVADAFGSTAAAYLTSTVHATGADLQTLADTVRATPDAAVLDLGCGAGHASFAVA
CCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
PHVREVVAYDLAAPMLATVDAAARERRLANVRTQQGPAERLPFDAATFDWVVSRMSAHHW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHH
HDVRAALAEVRRVLKPGGRVLMIDIAGNDHPLLDTYLQAAEVLRDASHVRDYRADEWLAM
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FRDAGFEAHVKRRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRAYYAVQADGSF
HHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCC
EHDALLIDAH
CCCEEEEECC
>Mature Secondary Structure
MKHHDQVADAFGSTAAAYLTSTVHATGADLQTLADTVRATPDAAVLDLGCGAGHASFAVA
CCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEC
PHVREVVAYDLAAPMLATVDAAARERRLANVRTQQGPAERLPFDAATFDWVVSRMSAHHW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHH
HDVRAALAEVRRVLKPGGRVLMIDIAGNDHPLLDTYLQAAEVLRDASHVRDYRADEWLAM
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FRDAGFEAHVKRRWRLPIDFDTWVARIRTPADSVTGIRALWAHAPDEVRAYYAVQADGSF
HHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEEECCCCC
EHDALLIDAH
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]