| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is metG
Identifier: 161524036
GI number: 161524036
Start: 935532
End: 937700
Strand: Reverse
Name: metG
Synonym: Bmul_0857
Alternate gene names: 161524036
Gene position: 937700-935532 (Counterclockwise)
Preceding gene: 161524037
Following gene: 161524033
Centisome position: 27.19
GC content: 65.84
Gene sequence:
>2169_bases ATGTCCGCATCCGACCTCACTTCCGTGCAGGCCGCGGCGCCGCAAGGCCGCCGCCAGATCCTCGTCACGTCCGCCCTGCC CTACGCCAACGGCCAGATCCATATCGGCCATCTGGTCGAGTACATCCAGACCGACATCTGGGTGCGGACGCTGCGAATGC ACGGGCACGAGGTCTACTACATCGGCGCCGACGACACGCACGGCACGCCGGTCATGCTGCGCGCGGAGAAGGAAGGCCTG ACGCCGAAGCAGCTGATCGAGCGCGTATGGGCCGAGCACAAGCGCGACTTCGACAGCTTCGGCGTGTCGTTCGACAACTT CTACTCGACCGATTCGGAAGAAAACCGCCAGCTGAGCGAGAAGATCTACCTCGCGCTGAAGGACAACGGGCTGATCGCCG AGCGCGAGATCGAGCAGGCGTACGACCCGGTCAAGGAGATGTTCCTGCCGGACCGTTTCATCAAGGGCGAGTGCCCGAAG TGCCACGCGAAGGACCAGTACGGCGACAGCTGCGAAGTGTGCGGCTCGACCTACCTGCCGACCGAGCTGCTGAACCCGTA TTCGGTCGTGTCGGGCGCGACGCCCGTGCGCAAGACGTCGAAGCACTACTTCTTCCGCCTGTCCGACCCGCGCTGCGAGA CGTTCCTGCGCGAATGGGTGAGCGGCCTCGCGCAGCCCGAAGCGACCAACAAGATGCGCGAATGGCTCGGCGACGCCGGC GAAGCCAAGCTCGCCGACTGGGACATCTCGCGCGACGCACCGTATTTCGGCTTCGAGATCCCCGGCGCGCCGGGCAAGTA CTTCTACGTGTGGCTCGATGCGCCGGTCGGCTACTACGCGAGCTTCAAGAATCTGTGCGATCGCAAAGGCATCGACTTCG ATGCGTGGATCCGCGCCGGTTCGAGCGCCGAGCAGTACCACTTCATCGGCAAGGACATCCTGTATTTCCACACGCTGTTC TGGCCGGCGATGCTGCAGTTCTCGGGCCACCGCACGCCGACCAACGTGTTCGCGCACGGCTTCCTGACCGTCGACGGCGC GAAGATGTCGAAGTCGCGCGGCACGTTCATTACCGCGCAGAGCTATATCGACACCGGCCTGAACCCCGAATGGCTGCGCT ACTACTTCGCCGCGAAGCTGAACGCGACGATGGAAGACATCGATCTGAACCTCGACGACTTCCAGGCGCGCGTGAATAGC GACCTCGTCGGCAAGTACGTGAACATCGCGAGCCGCGCGGCGGGCTTTCTGATCAAGCGCTTCGACGGCCGCGTGCAGGA CAGCGCGATGAACCATCCGCTCGTCGCGAAGCTGCGCGAAGCGATTCCGCAGATCGCCGCGCACTACGAGGCGCGCGAGT ACGGCCGCGCGTTGCGCCACACGATGGAACTCGCCGACGAAGTGAACGCCTACGTCGACGGCGCCAAGCCGTGGGAGCTC GCGAAGGATCCGGCGAACGCGGTCGCGCTGCACGAAACCTGCAGCGTGAGCCTCGAGGCGTTCCGCCTGCTGTCGCTCGC GCTCAAGCCCGTGCTGCCGCGCGTGGCCGAAGCGGTCGAGGCGTTCTTCGGCATCGCGCCGCTCGCGTGGGCCGATGCCG CGAAGCCGCTGTCGTCCGCGCAGCCGATCAAGGCCTACCAGCACCTGATGACGCGCGTCGACGCGAAGCAGATCGAAGCG CTGCTCGCCGCCAACCGCGATTCGCTGCAGGCCGACGCAACGGCCGCCGGCGGCGCGGGCGCCGCGACGGCGAAGGGTGC GAAAGCCGCGAAGGCCGATGCGAAGCCGGTCAGCGCGAAAGCGCCCGCCGCGAACGGTGCCGACGACGCAACGATTTCGA TCGACGATTTCGCGAAGATCGATCTGCGCATCGCGAAGATCGTCGCGTGCCAGGCCGTCGAAGGGTCGGACAAGCTGCTG CAGCTGACGCTCGACGTCGGCGAGGAGAAGACGCGCAACGTGTTCTCGGGGATCAAGTCCGCGTATCAGCCCGAGCAGCT CGTCGGCAAGCTGACGGTCATGGTCGCGAACCTCGCGCCGCGCAAGATGAAGTTCGGGCTGTCCGAAGGGATGGTGCTCG CGGCCTCGGCGACCGACGAGAAGGCCGAACCGGGGCTCTATATCCTCGAGCCGCACAGCGGCGCGAAGCCCGGCATGCGC GTGAAGTAA
Upstream 100 bases:
>100_bases CGGCTGCCGAACCGCCGCGCGCCGGCGCCGCGCCTGCCCGGTCCGCGCCCCTGCTAGAATCGCAGTTTCCGTCGTTTTCC GCTGTTCCTCTACAGACCCT
Downstream 100 bases:
>100_bases GCAGCGCGCCTCGCCCGCCCGAACCGCCCCGCACCGCTCGTGCGGGGCTTTTTTTCGTCGGTCGGCAGCGCGGGCCGGCG AGCGTGTTCTCAGCGCCGCC
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MSASDLTSVQAAAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAEKEGL TPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQAYDPVKEMFLPDRFIKGECPK CHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVRKTSKHYFFRLSDPRCETFLREWVSGLAQPEATNKMREWLGDAG EAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKDILYFHTLF WPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYFAAKLNATMEDIDLNLDDFQARVNS DLVGKYVNIASRAAGFLIKRFDGRVQDSAMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWEL AKDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAPLAWADAAKPLSSAQPIKAYQHLMTRVDAKQIEA LLAANRDSLQADATAAGGAGAATAKGAKAAKADAKPVSAKAPAANGADDATISIDDFAKIDLRIAKIVACQAVEGSDKLL QLTLDVGEEKTRNVFSGIKSAYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYILEPHSGAKPGMR VK
Sequences:
>Translated_722_residues MSASDLTSVQAAAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAEKEGL TPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQAYDPVKEMFLPDRFIKGECPK CHAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVRKTSKHYFFRLSDPRCETFLREWVSGLAQPEATNKMREWLGDAG EAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKDILYFHTLF WPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYFAAKLNATMEDIDLNLDDFQARVNS DLVGKYVNIASRAAGFLIKRFDGRVQDSAMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWEL AKDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAPLAWADAAKPLSSAQPIKAYQHLMTRVDAKQIEA LLAANRDSLQADATAAGGAGAATAKGAKAAKADAKPVSAKAPAANGADDATISIDDFAKIDLRIAKIVACQAVEGSDKLL QLTLDVGEEKTRNVFSGIKSAYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYILEPHSGAKPGMR VK >Mature_721_residues SASDLTSVQAAAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYYIGADDTHGTPVMLRAEKEGLT PKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQAYDPVKEMFLPDRFIKGECPKC HAKDQYGDSCEVCGSTYLPTELLNPYSVVSGATPVRKTSKHYFFRLSDPRCETFLREWVSGLAQPEATNKMREWLGDAGE AKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAGSSAEQYHFIGKDILYFHTLFW PAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYFAAKLNATMEDIDLNLDDFQARVNSD LVGKYVNIASRAAGFLIKRFDGRVQDSAMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWELA KDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAPLAWADAAKPLSSAQPIKAYQHLMTRVDAKQIEAL LAANRDSLQADATAAGGAGAATAKGAKAAKADAKPVSAKAPAANGADDATISIDDFAKIDLRIAKIVACQAVEGSDKLLQ LTLDVGEEKTRNVFSGIKSAYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYILEPHSGAKPGMRV K
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain
Homologues:
Organism=Homo sapiens, GI14043022, Length=564, Percent_Identity=27.3049645390071, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI24308436, Length=538, Percent_Identity=26.9516728624535, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI4507947, Length=145, Percent_Identity=35.1724137931034, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1788432, Length=715, Percent_Identity=53.006993006993, Blast_Score=751, Evalue=0.0, Organism=Escherichia coli, GI1789455, Length=111, Percent_Identity=36.9369369369369, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17540794, Length=678, Percent_Identity=25.9587020648968, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI212645096, Length=542, Percent_Identity=24.169741697417, Blast_Score=139, Evalue=7e-33, Organism=Caenorhabditis elegans, GI71992781, Length=432, Percent_Identity=23.3796296296296, Blast_Score=102, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6321704, Length=563, Percent_Identity=27.886323268206, Blast_Score=230, Evalue=8e-61, Organism=Saccharomyces cerevisiae, GI6321610, Length=544, Percent_Identity=24.6323529411765, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24655311, Length=523, Percent_Identity=29.0630975143403, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI21358483, Length=552, Percent_Identity=26.8115942028986, Blast_Score=132, Evalue=8e-31,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): SYM_BURM1 (A9AHJ8)
Other databases:
- EMBL: CP000868 - EMBL: AP009385 - RefSeq: YP_001579048.1 - RefSeq: YP_001946831.1 - ProteinModelPortal: A9AHJ8 - SMR: A9AHJ8 - GeneID: 5766674 - GeneID: 6358528 - GenomeReviews: AP009385_GR - GenomeReviews: CP000868_GR - KEGG: bmj:BMULJ_02401 - KEGG: bmu:Bmul_0857 - HOGENOM: HBG721667 - OMA: SAYQPEQ - ProtClustDB: PRK00133 - GO: GO:0005737 - HAMAP: MF_00098 - InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 - Gene3D: G3DSA:2.40.50.140 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01041 - TIGRFAMs: TIGR00398 - TIGRFAMs: TIGR00399
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind; SSF50249 Nucleic_acid_OB; SSF47323 tRNAsyn_1a_bind
EC number: =6.1.1.10
Molecular weight: Translated: 79632; Mature: 79501
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00178 AA_TRNA_LIGASE_I; PS50886 TRBD
Important sites: BINDING 351-351
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASDLTSVQAAAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYY CCCCHHCHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE IGADDTHGTPVMLRAEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSE EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCHHHHHHHH KIYLALKDNGLIAEREIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLP EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCC TELLNPYSVVSGATPVRKTSKHYFFRLSDPRCETFLREWVSGLAQPEATNKMREWLGDAG HHHCCCHHHHCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC EAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAG CCEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHCCC SSAEQYHFIGKDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCCCEEEEH SYIDTGLNPEWLRYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKR HHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FDGRVQDSAMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWEL HCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AKDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAPLAWADAAKPLSSA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC QPIKAYQHLMTRVDAKQIEALLAANRDSLQADATAAGGAGAATAKGAKAAKADAKPVSAK CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC APAANGADDATISIDDFAKIDLRIAKIVACQAVEGSDKLLQLTLDVGEEKTRNVFSGIKS CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHH AYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYILEPHSGAKPGMR CCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCC VK CC >Mature Secondary Structure SASDLTSVQAAAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTLRMHGHEVYY CCCHHCHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE IGADDTHGTPVMLRAEKEGLTPKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSE EECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCCHHHHHHHH KIYLALKDNGLIAEREIEQAYDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLP EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCC TELLNPYSVVSGATPVRKTSKHYFFRLSDPRCETFLREWVSGLAQPEATNKMREWLGDAG HHHCCCHHHHCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC EAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCDRKGIDFDAWIRAG CCEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHCCC SSAEQYHFIGKDILYFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCCCEEEEH SYIDTGLNPEWLRYYFAAKLNATMEDIDLNLDDFQARVNSDLVGKYVNIASRAAGFLIKR HHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FDGRVQDSAMNHPLVAKLREAIPQIAAHYEAREYGRALRHTMELADEVNAYVDGAKPWEL HCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AKDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAEAVEAFFGIAPLAWADAAKPLSSA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC QPIKAYQHLMTRVDAKQIEALLAANRDSLQADATAAGGAGAATAKGAKAAKADAKPVSAK CHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC APAANGADDATISIDDFAKIDLRIAKIVACQAVEGSDKLLQLTLDVGEEKTRNVFSGIKS CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHH AYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASATDEKAEPGLYILEPHSGAKPGMR CCCHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCC VK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA