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The map label for this gene is ycjO [C]

Identifier: 161523883

GI number: 161523883

Start: 772535

End: 773482

Strand: Direct

Name: ycjO [C]

Synonym: Bmul_0703

Alternate gene names: 161523883

Gene position: 772535-773482 (Clockwise)

Preceding gene: 161523882

Following gene: 161523884

Centisome position: 22.4

GC content: 65.19

Gene sequence:

>948_bases
ATGCGTCATTTGCGTCTTCCCCTGAATCACGCGTCGTCGGTCGGCGACGCGTCGTCGTCGCCCGGCGCGGCGCGCCGTGC
CGGCGGCGGCGCGCGCTGGCTCGTGTCGCCGTCCGTCGCGGTGCTGCTGCTGTGGATGTCGATTCCGCTCGCGATGACGA
TCTGGTATTCGTTCTCGCGCTACAACCTGCTCAATCCGGACGTGAAGGGTTTCGCCGGGTTCGACAACTACCGCTTCCTC
GCGACCGATCCGTCGTTCCTGCCCGCCATCTGGCATACGCTCGTGCTGATCGGCGCGGTGCTCGCGATCACGGTGATCGG
CGGCGTGCTGATGGCCGTGCTGTTCGACCGAAAGTTCTACGGGCAGGGCATCGCGCGGCTGCTTGCGATCGCGCCGTTCT
TCGTGATGCCGACGGTCTCCGCGCTGATCTGGAAGAACATGATCCTGCACCCCGTGTACGGGCTCGTCGCGAACGCGATG
CGCGCGCTCGGCATGCAGCCGATCGACTGGTTCGCCGACTACCCGCTGACCGCCGTGATCATGATCGTCGCGTGGCAGTG
GCTGCCGTTCGCATTCCTGATCCTGTTCACGGCGATCCAGTCGCTCGACCAGGAGCAGAAGGAAGCCGCGCGCATCGACG
GCGCGGGCCCGATCGCGATGTTCTTCTACATCACGCTGCCGCATCTGAAGCGCGCGATCGCGGTCGTCGTGATGATGGAG
ACGATCTTCCTGCTGTCGATCTTCGCGGAGATCTACACGACGACCGGCGGCGGCCCCGGCGATGCGACCACGAACCTGTC
GTACCTGATCTATGCGCTCGGCCTGCAGCAGTTCGACGTCGGCCTCGCGTCCGCAGGCGGGATCATCGCCGTGGTGGTCG
CGAACGTCGTGTCGTTCTTCCTCGTGCGGATGCTCGCGCGCAATCTGAAGGGGGAGTACGAGAAATGA

Upstream 100 bases:

>100_bases
GCGACGCGCGCCGTGCGCGAAACGCGTGCGGCGCGCCTCGCCGAAGCGGCAACGCGGGCCGGCCGTTCGCGCCCGCGTCT
CAACCGGAGGGACTCCGATC

Downstream 100 bases:

>100_bases
GCGACCTGACTATCGAAAGCCGCCGCACGCCCGCCGTGTTCGACCTCGTGCGCCGCGCGCTGCCCGGCACGCTCGCGTGG
CTGATCGCGCTGCTGCTGTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRHLRLPLNHASSVGDASSSPGAARRAGGGARWLVSPSVAVLLLWMSIPLAMTIWYSFSRYNLLNPDVKGFAGFDNYRFL
ATDPSFLPAIWHTLVLIGAVLAITVIGGVLMAVLFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLVANAM
RALGMQPIDWFADYPLTAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPIAMFFYITLPHLKRAIAVVVMME
TIFLLSIFAEIYTTTGGGPGDATTNLSYLIYALGLQQFDVGLASAGGIIAVVVANVVSFFLVRMLARNLKGEYEK

Sequences:

>Translated_315_residues
MRHLRLPLNHASSVGDASSSPGAARRAGGGARWLVSPSVAVLLLWMSIPLAMTIWYSFSRYNLLNPDVKGFAGFDNYRFL
ATDPSFLPAIWHTLVLIGAVLAITVIGGVLMAVLFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLVANAM
RALGMQPIDWFADYPLTAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPIAMFFYITLPHLKRAIAVVVMME
TIFLLSIFAEIYTTTGGGPGDATTNLSYLIYALGLQQFDVGLASAGGIIAVVVANVVSFFLVRMLARNLKGEYEK
>Mature_315_residues
MRHLRLPLNHASSVGDASSSPGAARRAGGGARWLVSPSVAVLLLWMSIPLAMTIWYSFSRYNLLNPDVKGFAGFDNYRFL
ATDPSFLPAIWHTLVLIGAVLAITVIGGVLMAVLFDRKFYGQGIARLLAIAPFFVMPTVSALIWKNMILHPVYGLVANAM
RALGMQPIDWFADYPLTAVIMIVAWQWLPFAFLILFTAIQSLDQEQKEAARIDGAGPIAMFFYITLPHLKRAIAVVVMME
TIFLLSIFAEIYTTTGGGPGDATTNLSYLIYALGLQQFDVGLASAGGIIAVVVANVVSFFLVRMLARNLKGEYEK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=276, Percent_Identity=29.3478260869565, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1789861, Length=297, Percent_Identity=27.9461279461279, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790465, Length=242, Percent_Identity=28.9256198347107, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34466; Mature: 34466

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]