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The map label for this gene is yieP [H]

Identifier: 161523812

GI number: 161523812

Start: 692684

End: 693352

Strand: Direct

Name: yieP [H]

Synonym: Bmul_0632

Alternate gene names: 161523812

Gene position: 692684-693352 (Clockwise)

Preceding gene: 161523810

Following gene: 161523815

Centisome position: 20.09

GC content: 70.85

Gene sequence:

>669_bases
TTGCATGGACAAACGGCCTTCCGGCTCGCGACGGCGATCCTGCGCGGCGACTATCCGCCCGATTCGCTGCTGCCGCGCGA
GCCCGACCTGATGGCGATGTTCGGCGTGAGCCGCACGGTGTTGCGCGAAGCGTTGCGCACGCTGACGTCGAAGGGGCTCG
TCGAATCGCGTCCGAAGGTCGGCACGCGCGTGCGCCCGCGTCGCGCGTGGAATCTGCTCGATGCCGATCTGCTCGACTGG
TATGCGCGCGTCGCGCCGGCCCTGTCGTTCGCGCTGAAGCTGCAGGAGATGCGCGAAATGATCGAGCCGCATGCGGCCGC
GATGGCCGCACGCGTGCGGGCCGCGGATGCGATCGCGGCGATCGACGAAGCGTTGGGTGCGATGGCCGCCGCGCGCAACG
TCGACGAATGGGTGCGCGCGGACCTGCGGTTTCATCTCGGCGTGCTCGAGGCGGGCGGCAACGAGTTGCTGGTGCCGCTC
GGCGCGCTGATCGATCGCACGCTGGAGGCGCAATTGCATCTGAATGCGCGGCGCGCGCACGTGTACAACGCGTCGCTGGC
CGAGCACGCGGCGGTCGGCGATGCGATTCGCGCGGGCGACGCGGACGGCGCGCGTCGCGCCATGGCGGCGCTGCTCGCGG
TGACGCGCGCGCGCATCGAGCAGTCGTGA

Upstream 100 bases:

>100_bases
CGCGTTATCCTAGCGTAGCGCGTTAAAAAATAGTATTAATAGCACTATTGCGCACATAGTGGGCAACCGCGCCCGACGGA
GAACGATCATTCAACGCGAT

Downstream 100 bases:

>100_bases
TGGGTGGGGCGCCCGGCACAAGCACTCGGCCTTCGCGCCGTTCGCTACGCGTTCGCGCAGCCGCCCTGTTTCAGCACGCG
CTGCGTCGACGCCGGATATT

Product: GntR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MHGQTAFRLATAILRGDYPPDSLLPREPDLMAMFGVSRTVLREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDW
YARVAPALSFALKLQEMREMIEPHAAAMAARVRAADAIAAIDEALGAMAAARNVDEWVRADLRFHLGVLEAGGNELLVPL
GALIDRTLEAQLHLNARRAHVYNASLAEHAAVGDAIRAGDADGARRAMAALLAVTRARIEQS

Sequences:

>Translated_222_residues
MHGQTAFRLATAILRGDYPPDSLLPREPDLMAMFGVSRTVLREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDW
YARVAPALSFALKLQEMREMIEPHAAAMAARVRAADAIAAIDEALGAMAAARNVDEWVRADLRFHLGVLEAGGNELLVPL
GALIDRTLEAQLHLNARRAHVYNASLAEHAAVGDAIRAGDADGARRAMAALLAVTRARIEQS
>Mature_222_residues
MHGQTAFRLATAILRGDYPPDSLLPREPDLMAMFGVSRTVLREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDW
YARVAPALSFALKLQEMREMIEPHAAAMAARVRAADAIAAIDEALGAMAAARNVDEWVRADLRFHLGVLEAGGNELLVPL
GALIDRTLEAQLHLNARRAHVYNASLAEHAAVGDAIRAGDADGARRAMAALLAVTRARIEQS

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=216, Percent_Identity=34.7222222222222, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI48994955, Length=225, Percent_Identity=32.4444444444444, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790032, Length=202, Percent_Identity=32.1782178217822, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 24153; Mature: 24153

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGQTAFRLATAILRGDYPPDSLLPREPDLMAMFGVSRTVLREALRTLTSKGLVESRPKV
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
GTRVRPRRAWNLLDADLLDWYARVAPALSFALKLQEMREMIEPHAAAMAARVRAADAIAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDEALGAMAAARNVDEWVRADLRFHLGVLEAGGNELLVPLGALIDRTLEAQLHLNARRAH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHCHHHHH
VYNASLAEHAAVGDAIRAGDADGARRAMAALLAVTRARIEQS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHGQTAFRLATAILRGDYPPDSLLPREPDLMAMFGVSRTVLREALRTLTSKGLVESRPKV
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
GTRVRPRRAWNLLDADLLDWYARVAPALSFALKLQEMREMIEPHAAAMAARVRAADAIAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDEALGAMAAARNVDEWVRADLRFHLGVLEAGGNELLVPLGALIDRTLEAQLHLNARRAH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHCHHHHH
VYNASLAEHAAVGDAIRAGDADGARRAMAALLAVTRARIEQS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]