Definition Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence.
Accession NC_010084
Length 3,448,466

Click here to switch to the map view.

The map label for this gene is 161523752

Identifier: 161523752

GI number: 161523752

Start: 623835

End: 624158

Strand: Direct

Name: 161523752

Synonym: Bmul_0572

Alternate gene names: NA

Gene position: 623835-624158 (Clockwise)

Preceding gene: 161523751

Following gene: 161523753

Centisome position: 18.09

GC content: 73.15

Gene sequence:

>324_bases
ATGCCGATCTACGCCTATCGATGCGAAGCGTGCGGTTTCGCGAAGGACGTGCTCCAGAAGATGAGCGACGCGCCGCTGTC
GCAGTGTCCGGAATGCGGGAAGGATGCGTTCCGCAAGCAGGTGACCGCCGCGGGCTTCCAGCTGAAGGGCTCGGGCTGGT
ATGTCACCGATTTTCGCGGCGGCTCGGGCGGCGCCAGCGCACCGGCGACGGCCGCGTCGTCGGGCGACGCGGCGCCGGCC
GCACCCGCTGCGGCTGCGCCGGCCGCCGAAAGCACGACGACGAGCGCCGCCGCCCCGGCCGCGGCGCCCGCCGCCGGCAG
TTGA

Upstream 100 bases:

>100_bases
GCTGACGCGCATGCGTCGCGGCGGTTGCCGGAGCGCGCCGGGGTTTCGGCTATAATTCAAGGTTTTGCAAGCCGTTTCCA
GTTTCTGCGGGAAAAATATC

Downstream 100 bases:

>100_bases
CCGCCGCGGCCCGGCCGGGCCGCGCTCACTCCGCGCCGCCGGCGCGGTTCATTGACGGCAGATGATGAAAAAGACGACCC
TGAAATCGGTGTTTCTGACC

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MPIYAYRCEACGFAKDVLQKMSDAPLSQCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGASAPATAASSGDAAPA
APAAAAPAAESTTTSAAAPAAAPAAGS

Sequences:

>Translated_107_residues
MPIYAYRCEACGFAKDVLQKMSDAPLSQCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGASAPATAASSGDAAPA
APAAAAPAAESTTTSAAAPAAAPAAGS
>Mature_106_residues
PIYAYRCEACGFAKDVLQKMSDAPLSQCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGASAPATAASSGDAAPAA
PAAAAPAAESTTTSAAAPAAAPAAGS

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10404; Mature: 10272

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYAYRCEACGFAKDVLQKMSDAPLSQCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRG
CCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEECCC
GSGGASAPATAASSGDAAPAAPAAAAPAAESTTTSAAAPAAAPAAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIYAYRCEACGFAKDVLQKMSDAPLSQCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRG
CCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEECCCCEEEEECCC
GSGGASAPATAASSGDAAPAAPAAAAPAAESTTTSAAAPAAAPAAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA