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The map label for this gene is ugpB [H]

Identifier: 161523478

GI number: 161523478

Start: 325871

End: 327205

Strand: Direct

Name: ugpB [H]

Synonym: Bmul_0298

Alternate gene names: 161523478

Gene position: 325871-327205 (Clockwise)

Preceding gene: 161523477

Following gene: 161523479

Centisome position: 9.45

GC content: 65.24

Gene sequence:

>1335_bases
ATGAAGAAGAAGCCTGCGGGGACCGTGGTTCGTTCGATCGTGCTCGGCGGCGCGCTGATGTTCGGTGTGCAGCATGCGGC
ATTCGCGGTGACGGAGATCCAGTTCTGGCACGCGATGGAAGCCGCGCTCGGCGAGCGCGTGAACGAGCTGGCGACGCAAT
TCAACGCGTCGCAGAGCGATTACAAGATCGTGCCGGTCTTCAAGGGCACCTACGACCAGACGCTCGCGGCCGGTATCGCC
GCCTATCGCAGCGGCAACGCGCCGGCGATCCTGCAGGTGTACGAAGTGGGCACGGCCACGATGATGCAGGCGAAGAAGGC
CGTCGTGCCGGTGTACGACGTGTTCAAGCAAGCCGGCGTGCCGCTCGACGAAAAGGCGTTCGTGCCGACCATCGCGAGCT
ACTACAGCGACGCGAAGACGGGCCATCTCGTGTCGATGCCGTTCAACAGCTCGACGCCGGTGCTGTACTACAACAAGGAC
GCGTTCAAGAAGGCCGGGCTCGACCCGAACCAGCCGCCGAAGACCTGGGCGGACGTGAAGGCCGATTCGGAGAAGCTGCG
CAAGGCCGGCATGACGTGCGGCTTCACGACGGGCTGGCAGGGCTGGATCCAGCTCGAGAACTACAGCGCGTGGCATGCGC
TGCCGTTCGCGAGCCGCAACAACGGCTTCGACGGCTCGGACGCGGTGCTCGAGTTCAACAAGCCGCAGCAGATCGCGCAT
ATCGCGTTCCTGCAAGCGATGGCGAAGGACGGCACGTTCACGTACGCGGGCCGCAAGGACGAGGCGTCCGCGAAATTTTA
TAGCGGCGACTGCGGGATCATGACGACGTCGTCGGGCGCGCTCGCGAACGTGCAGAAATTCGCGAAGTTCAGCTACGGCA
CGGGGATGATGCCGTACGACGCGAACGTGAAGGGCGCGCCGCAGAACGCGATCATCGGCGGCGCGAGCCTGTGGGTGCTG
GCCGGCAAGGATCCGGCGACGTACAAGGGTGTCGCGAAATTCCTCGCGTTCCTCGCGTCGCCGCCGATCGCCGCGAAGTG
GCACCAGGAGACGGGCTACCTGCCGGTCACGACCGCGGCCTACGACCTCACGCGCCAGCAGGGTTTCTATGCGAAGAATC
CGAGCGCCGAAACCGCGATCAAGCAGATGCTGAACAAGCCGCCGCTGCCCTACACGAAGGGGCTGCGCCTCGGCAACATG
CCGCAGATCCGTACCGTCGTCGACGAAGAGCTCGAGCAGGTCTGGGCGCAGAAGAAGTCGCCGAAGGACGCGCTCGACGC
GGCGGCGTCGCGCGGCAACGAACTGCTGCGCCGCTTCGAGAAGTCGGGCGGCTGA

Upstream 100 bases:

>100_bases
AACGACAACTGACTGTCATAAACGATCACTAGACTTCGCCGGTTCAATGGCGACGGGAAGGTTGCACACGCTGTTGGTAA
CGTTTTCATAGGAGAGGTCG

Downstream 100 bases:

>100_bases
GCCCGTCTCGCGCCGTGCCGCGGGCCGCGTCGCAGATGCGCCGCGCGCCGCGGCGCGGCTTCGTTTCCGTTTCGTCTGAC
CGGATCTTCGCGATGCAATC

Product: glycerol-3-phosphate transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKKKPAGTVVRSIVLGGALMFGVQHAAFAVTEIQFWHAMEAALGERVNELATQFNASQSDYKIVPVFKGTYDQTLAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGLDPNQPPKTWADVKADSEKLRKAGMTCGFTTGWQGWIQLENYSAWHALPFASRNNGFDGSDAVLEFNKPQQIAH
IAFLQAMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAFLASPPIAAKWHQETGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEELEQVWAQKKSPKDALDAAASRGNELLRRFEKSGG

Sequences:

>Translated_444_residues
MKKKPAGTVVRSIVLGGALMFGVQHAAFAVTEIQFWHAMEAALGERVNELATQFNASQSDYKIVPVFKGTYDQTLAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGLDPNQPPKTWADVKADSEKLRKAGMTCGFTTGWQGWIQLENYSAWHALPFASRNNGFDGSDAVLEFNKPQQIAH
IAFLQAMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAFLASPPIAAKWHQETGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEELEQVWAQKKSPKDALDAAASRGNELLRRFEKSGG
>Mature_444_residues
MKKKPAGTVVRSIVLGGALMFGVQHAAFAVTEIQFWHAMEAALGERVNELATQFNASQSDYKIVPVFKGTYDQTLAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGLDPNQPPKTWADVKADSEKLRKAGMTCGFTTGWQGWIQLENYSAWHALPFASRNNGFDGSDAVLEFNKPQQIAH
IAFLQAMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAFLASPPIAAKWHQETGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEELEQVWAQKKSPKDALDAAASRGNELLRRFEKSGG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=71.1538461538462, Blast_Score=646, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48157; Mature: 48157

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKPAGTVVRSIVLGGALMFGVQHAAFAVTEIQFWHAMEAALGERVNELATQFNASQSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKIVPVFKGTYDQTLAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGV
EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCC
PLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGLDPNQPPKTWADVK
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHCC
ADSEKLRKAGMTCGFTTGWQGWIQLENYSAWHALPFASRNNGFDGSDAVLEFNKPQQIAH
CCHHHHHHCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHH
IAFLQAMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYD
HHHHHHHHCCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC
ANVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAFLASPPIAAKWHQETGYLPVTTAA
CCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEHHH
YDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEELEQVWAQKKS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PKDALDAAASRGNELLRRFEKSGG
CHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKPAGTVVRSIVLGGALMFGVQHAAFAVTEIQFWHAMEAALGERVNELATQFNASQSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKIVPVFKGTYDQTLAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGV
EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCC
PLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGLDPNQPPKTWADVK
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHCC
ADSEKLRKAGMTCGFTTGWQGWIQLENYSAWHALPFASRNNGFDGSDAVLEFNKPQQIAH
CCHHHHHHCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHH
IAFLQAMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYD
HHHHHHHHCCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC
ANVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAFLASPPIAAKWHQETGYLPVTTAA
CCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEHHH
YDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEELEQVWAQKKS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PKDALDAAASRGNELLRRFEKSGG
CHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]