| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is dsbD [H]
Identifier: 161523458
GI number: 161523458
Start: 303764
End: 305608
Strand: Direct
Name: dsbD [H]
Synonym: Bmul_0278
Alternate gene names: 161523458
Gene position: 303764-305608 (Clockwise)
Preceding gene: 161523457
Following gene: 161523461
Centisome position: 8.81
GC content: 69.11
Gene sequence:
>1845_bases ATGTTTAACGGTATGGCGCTTCCCGTGCGCGCGCGTGCGCTGCAATTTCTCGCATTCCTGTTGTCGGTGCTGTGCATGCT GGGCGGCATGTCGATCGCACGCGCGGCCGACGATTTCCTCGATCCGGCGGTCGCGTTCAAGTTCAGCGCCAGCGAAGCGC CGGGGCAGGTCGACGTGCACTTCAAGGTCGCGGACGGCTACTACCTGTACCGCGAGCGATTCGCGTTCGCGGTGAAAAGC GGCCAGGCGACGCTCGGCGAGCCGCAACTGCCCGCCGGCCATGTGAAGTTCGACCAGACCTTCGGCAAGAACGTCGAGAC GTATCGCGGCGACGTCGTGATCCACGTGCCGGTGAAGCAGGCGGCCGGGCCGTTCGAGCTCGCCGTCACGTCACAGGGCT GTGCGGACGAAGGCATCTGCTATCCGCCCGCCGAACATGTCGTGAAGATCGACGGCGCCGCGCTCGGCACTGCATCCAAT GGGGCGGGCAATGCGGCCGCGCAGGGCAGCTGGTTCGACAAGGTCACGAGCGCCGATTTCGCGCAGTCGCTGCTCGAAGG GCAGGGCTTCTTCACGATCGTCGCGTTGTACTTCGTCGCGGGCGTCGTGCTGAGCCTGCTGCCGTGTTCGTATCCGATGA TTCCGATCGTGTCGGCGATCATCATCGGCCAGGGCACGCGCGCGACGCACGCACGCGGCTTCGCGCTGTCGCTCACGTAC GTGGTCGGCATGGCGCTCGTCTATACGGTGCTCGGGATCGCCGCGGCGCTGATCGGCCAGAGCCTCGGCGCATGGCTGCA GAACCCGTGGGTGCTCGGCGCATTCGCCGTGCTGCTGACGGCATTTGCGGTATCGCTGATTTCCGGCAAGGACATCGCGT TGCCGCAGCGCTGGCAGAACGGTGCGGCCGAAGCGTCGGGCGCGCGTCAGGGCGGTCACTTCGCGGCGGTCGCGGCGATG GGCGCGCTGTCGGCGCTCGTCGTCGGCGCCTGCATGACGGCGCCGCTGTTCGCGGTCCTCGCATTCATCGCGCATACGGG CAACGCGTGGCTCGGCGGCGCCGCGCTGTTCGCAATGGGGATGGGGCTCGGCGTGCCGCTGCTCGTCGTGGGCGTCGGTG CAGGTACGCTGCTGCCGCGCGCAGGCGCGTGGATGGACGGCGTGAAGGTGTTCTTCGGGATCGTGCTGCTCGCGGCCGCG CTGTGGATCGTCTGGCCGGTGCTCGGCGGCGGATTGAAGATGATGCTGGCCGCGCTGTGGCTGCTCGTCGCCGCAGCGGC GCTCGGGCTGTTCACGCCGAATGCGGGTGCCGCCTCGATCTGGCGCCGGCTCGCGCGCGGTCTCGGCGCGGCGCTCGCGA TCTGGGCCGCCACGCTGCTCGTCGGCCTCGCCGCCGGTTCGACCGATCCGGTGAAGCCGCTCGCGGTGCTCGCGTCGCGC GCGGCGGCGCCCGGCGGCGATGCAGCGGCGGCCGCCGCGCACGAGGGGCCGGCATTCGCGGCAGTGCGCTCGAGCGGCGA GCTCGATGCGCTGCTGAAGACGTCCGCGCAGCCGGTGATGCTCGACTTCTACGCCGACTGGTGCGTGAGCTGCAAGGAGA TGGAGCACTTGACGTTTACCGACGCGCGCGTGCAGGCGCGGCTCGCGCAGCTCCATCTCGTGCGTGCGGACGTGACCGCC AACAATGCGGACGATCAGGCGCTGCTCAAGCGCTTCGGCCTGTTCGGGCCGCCGGGCATCATCTTCTTCGATCGCAACGG CAAGGAAATCGCGCGCGTGGTCGGCTATCAGGCGGCGGAGACGTTCCTGCGCAGCCTCGATCGCGCGGCCGTGCCGACCG TATAA
Upstream 100 bases:
>100_bases GCGCATCATCCGTACGACACGCCCGAAATCCTGTCGTGGCAGGCGACCGCATCGGACGCCTACGGTCAGTGGGTGGCCGG CGAAACTCAACGTCTCTTTC
Downstream 100 bases:
>100_bases CGAACGCACCGTACGCCAGACGACGTCGCCGCGCGATCGAGCGCGCACAAAAAACGGCGGAACACCGAAGTGTTCCGCCG TTTCGTTTTGCAGCCGCGCG
Product: protein-disulfide reductase
Products: NA
Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MFNGMALPVRARALQFLAFLLSVLCMLGGMSIARAADDFLDPAVAFKFSASEAPGQVDVHFKVADGYYLYRERFAFAVKS GQATLGEPQLPAGHVKFDQTFGKNVETYRGDVVIHVPVKQAAGPFELAVTSQGCADEGICYPPAEHVVKIDGAALGTASN GAGNAAAQGSWFDKVTSADFAQSLLEGQGFFTIVALYFVAGVVLSLLPCSYPMIPIVSAIIIGQGTRATHARGFALSLTY VVGMALVYTVLGIAAALIGQSLGAWLQNPWVLGAFAVLLTAFAVSLISGKDIALPQRWQNGAAEASGARQGGHFAAVAAM GALSALVVGACMTAPLFAVLAFIAHTGNAWLGGAALFAMGMGLGVPLLVVGVGAGTLLPRAGAWMDGVKVFFGIVLLAAA LWIVWPVLGGGLKMMLAALWLLVAAAALGLFTPNAGAASIWRRLARGLGAALAIWAATLLVGLAAGSTDPVKPLAVLASR AAAPGGDAAAAAAHEGPAFAAVRSSGELDALLKTSAQPVMLDFYADWCVSCKEMEHLTFTDARVQARLAQLHLVRADVTA NNADDQALLKRFGLFGPPGIIFFDRNGKEIARVVGYQAAETFLRSLDRAAVPTV
Sequences:
>Translated_614_residues MFNGMALPVRARALQFLAFLLSVLCMLGGMSIARAADDFLDPAVAFKFSASEAPGQVDVHFKVADGYYLYRERFAFAVKS GQATLGEPQLPAGHVKFDQTFGKNVETYRGDVVIHVPVKQAAGPFELAVTSQGCADEGICYPPAEHVVKIDGAALGTASN GAGNAAAQGSWFDKVTSADFAQSLLEGQGFFTIVALYFVAGVVLSLLPCSYPMIPIVSAIIIGQGTRATHARGFALSLTY VVGMALVYTVLGIAAALIGQSLGAWLQNPWVLGAFAVLLTAFAVSLISGKDIALPQRWQNGAAEASGARQGGHFAAVAAM GALSALVVGACMTAPLFAVLAFIAHTGNAWLGGAALFAMGMGLGVPLLVVGVGAGTLLPRAGAWMDGVKVFFGIVLLAAA LWIVWPVLGGGLKMMLAALWLLVAAAALGLFTPNAGAASIWRRLARGLGAALAIWAATLLVGLAAGSTDPVKPLAVLASR AAAPGGDAAAAAAHEGPAFAAVRSSGELDALLKTSAQPVMLDFYADWCVSCKEMEHLTFTDARVQARLAQLHLVRADVTA NNADDQALLKRFGLFGPPGIIFFDRNGKEIARVVGYQAAETFLRSLDRAAVPTV >Mature_614_residues MFNGMALPVRARALQFLAFLLSVLCMLGGMSIARAADDFLDPAVAFKFSASEAPGQVDVHFKVADGYYLYRERFAFAVKS GQATLGEPQLPAGHVKFDQTFGKNVETYRGDVVIHVPVKQAAGPFELAVTSQGCADEGICYPPAEHVVKIDGAALGTASN GAGNAAAQGSWFDKVTSADFAQSLLEGQGFFTIVALYFVAGVVLSLLPCSYPMIPIVSAIIIGQGTRATHARGFALSLTY VVGMALVYTVLGIAAALIGQSLGAWLQNPWVLGAFAVLLTAFAVSLISGKDIALPQRWQNGAAEASGARQGGHFAAVAAM GALSALVVGACMTAPLFAVLAFIAHTGNAWLGGAALFAMGMGLGVPLLVVGVGAGTLLPRAGAWMDGVKVFFGIVLLAAA LWIVWPVLGGGLKMMLAALWLLVAAAALGLFTPNAGAASIWRRLARGLGAALAIWAATLLVGLAAGSTDPVKPLAVLASR AAAPGGDAAAAAAHEGPAFAAVRSSGELDALLKTSAQPVMLDFYADWCVSCKEMEHLTFTDARVQARLAQLHLVRADVTA NNADDQALLKRFGLFGPPGIIFFDRNGKEIARVVGYQAAETFLRSLDRAAVPTV
Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=593, Percent_Identity=35.0758853288364, Blast_Score=317, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 63601; Mature: 63601
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNGMALPVRARALQFLAFLLSVLCMLGGMSIARAADDFLDPAVAFKFSASEAPGQVDVH CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEEECCCCCCEEEEE FKVADGYYLYRERFAFAVKSGQATLGEPQLPAGHVKFDQTFGKNVETYRGDVVIHVPVKQ EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCEECCCEEEEEEHHH AAGPFELAVTSQGCADEGICYPPAEHVVKIDGAALGTASNGAGNAAAQGSWFDKVTSADF CCCCEEEEEECCCCCCCCCCCCCHHHEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHH AQSLLEGQGFFTIVALYFVAGVVLSLLPCSYPMIPIVSAIIIGQGTRATHARGFALSLTY HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH VVGMALVYTVLGIAAALIGQSLGAWLQNPWVLGAFAVLLTAFAVSLISGKDIALPQRWQN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC GAAEASGARQGGHFAAVAAMGALSALVVGACMTAPLFAVLAFIAHTGNAWLGGAALFAMG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGLGVPLLVVGVGAGTLLPRAGAWMDGVKVFFGIVLLAAALWIVWPVLGGGLKMMLAALW HCCCCHHHHEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLVAAAALGLFTPNAGAASIWRRLARGLGAALAIWAATLLVGLAAGSTDPVKPLAVLASR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAAPGGDAAAAAAHEGPAFAAVRSSGELDALLKTSAQPVMLDFYADWCVSCKEMEHLTFT CCCCCCCHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCEEH DARVQARLAQLHLVRADVTANNADDQALLKRFGLFGPPGIIFFDRNGKEIARVVGYQAAE HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH TFLRSLDRAAVPTV HHHHHHHHHCCCCC >Mature Secondary Structure MFNGMALPVRARALQFLAFLLSVLCMLGGMSIARAADDFLDPAVAFKFSASEAPGQVDVH CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEEECCCCCCEEEEE FKVADGYYLYRERFAFAVKSGQATLGEPQLPAGHVKFDQTFGKNVETYRGDVVIHVPVKQ EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHCCCCCEECCCEEEEEEHHH AAGPFELAVTSQGCADEGICYPPAEHVVKIDGAALGTASNGAGNAAAQGSWFDKVTSADF CCCCEEEEEECCCCCCCCCCCCCHHHEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHH AQSLLEGQGFFTIVALYFVAGVVLSLLPCSYPMIPIVSAIIIGQGTRATHARGFALSLTY HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH VVGMALVYTVLGIAAALIGQSLGAWLQNPWVLGAFAVLLTAFAVSLISGKDIALPQRWQN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC GAAEASGARQGGHFAAVAAMGALSALVVGACMTAPLFAVLAFIAHTGNAWLGGAALFAMG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGLGVPLLVVGVGAGTLLPRAGAWMDGVKVFFGIVLLAAALWIVWPVLGGGLKMMLAALW HCCCCHHHHEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLVAAAALGLFTPNAGAASIWRRLARGLGAALAIWAATLLVGLAAGSTDPVKPLAVLASR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AAAPGGDAAAAAAHEGPAFAAVRSSGELDALLKTSAQPVMLDFYADWCVSCKEMEHLTFT CCCCCCCHHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCEEH DARVQARLAQLHLVRADVTANNADDQALLKRFGLFGPPGIIFFDRNGKEIARVVGYQAAE HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH TFLRSLDRAAVPTV HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]