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The map label for this gene is 161523327

Identifier: 161523327

GI number: 161523327

Start: 165770

End: 166663

Strand: Reverse

Name: 161523327

Synonym: Bmul_0147

Alternate gene names: NA

Gene position: 166663-165770 (Counterclockwise)

Preceding gene: 161523329

Following gene: 161523325

Centisome position: 4.83

GC content: 69.8

Gene sequence:

>894_bases
ATGAGCGAAGCACCCCACGAATCTCCCGTCAAAACCCCCGGGCAGCTGATTGCCCTCATCATCGCGTCGTTCGCGATTCC
GATTGCCCTCATCGTTCTGTTTGCCACCTATGCGAACCACGCGTTCCGCGCGGGCGCCGGCACGGACGCGCTGTCCGACG
ATCAGGTCGCGCGGCGCATCGCGCCGATCGCGCAGGTCGACGTGAAGGATGCCAACGCACCGCGCACGTACAAGACGGGT
GAGGAGGTGTACAAGGCGGTCTGCGTCACGTGCCACGGCACGGGCGCCGCGGGCGCGCCGAAGTTCGGCAACAAGGACGA
TTGGGCGCCGCGCATCGCGCAAGGCTTCGACACGCTGCTGAAGACGGCGCTCGCCGGCAAGGGCGCGATGCCGCCGCGCG
GCGGCACGAATCCCGACGACGTCAGCGACTACGAGATCGCGCGCGCGATCGTCTACATGGCGAACAACGACGGCGCGAAC
TTCCCCGAACCGGCCGCACCGGCCGCCAACGCGGCGCAGCCCGCCAGCGGCGCGGCAGGCGCATCGGGCGCCGCCGACGC
GGCCAGCGCGCAGATCGCCGCCGCGCAGGCCGCGATCGCCGCGATTCCGAAGGCCGGCGAAAAACCGGCAGCCGCGCCGA
CGAGCGCCGACGCCGCCTCGGCCGGCAAGGCGCTGTACACGCAGGTCTGCCAGGCCTGCCACGCAGCCGGCGTGCTCGGC
GCGCCGAAGTTCGGCAGCAAGGAAGACTGGGCGCCGCGCCTGAAGGACTCGATGGATACCGTCTACAACTACGCGCTGCA
CGGCAAGGGCGCGATGCCGCCGAAAGGCGGATCGAACGCGTCGGATGCCGACGTGAAGGCGGCCGTCGACTACATGGTCA
ACGCAGCGAAATAA

Upstream 100 bases:

>100_bases
GTGATGTAAACGTTCCGTCTATAATCGTCCGTGCTTCATTGGACAGCCATTTTGCCGTTGCACCGCGCTCACAATTCCTA
TTCACGGAGACGAGGCAAGC

Downstream 100 bases:

>100_bases
CGTACGCCGCGCGATAAAAAAACCCGCGACGCGTTGCGCGTCGCGGGTTTTTGTTTGTCCGCGCAATCGCCGCACCGGCG
CTGCGGCATCACTTCTGCAG

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSEAPHESPVKTPGQLIALIIASFAIPIALIVLFATYANHAFRAGAGTDALSDDQVARRIAPIAQVDVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRIAQGFDTLLKTALAGKGAMPPRGGTNPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQPASGAAGASGAADAASAQIAAAQAAIAAIPKAGEKPAAAPTSADAASAGKALYTQVCQACHAAGVLG
APKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Sequences:

>Translated_297_residues
MSEAPHESPVKTPGQLIALIIASFAIPIALIVLFATYANHAFRAGAGTDALSDDQVARRIAPIAQVDVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRIAQGFDTLLKTALAGKGAMPPRGGTNPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQPASGAAGASGAADAASAQIAAAQAAIAAIPKAGEKPAAAPTSADAASAGKALYTQVCQACHAAGVLG
APKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
>Mature_296_residues
SEAPHESPVKTPGQLIALIIASFAIPIALIVLFATYANHAFRAGAGTDALSDDQVARRIAPIAQVDVKDANAPRTYKTGE
EVYKAVCVTCHGTGAAGAPKFGNKDDWAPRIAQGFDTLLKTALAGKGAMPPRGGTNPDDVSDYEIARAIVYMANNDGANF
PEPAAPAANAAQPASGAAGASGAADAASAQIAAAQAAIAAIPKAGEKPAAAPTSADAASAGKALYTQVCQACHAAGVLGA
PKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29945; Mature: 29814

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPHESPVKTPGQLIALIIASFAIPIALIVLFATYANHAFRAGAGTDALSDDQVARRI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
APIAQVDVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRIAQGFDTLL
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KTALAGKGAMPPRGGTNPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQPASGAAG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
ASGAADAASAQIAAAQAAIAAIPKAGEKPAAAPTSADAASAGKALYTQVCQACHAAGVLG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
APKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEAPHESPVKTPGQLIALIIASFAIPIALIVLFATYANHAFRAGAGTDALSDDQVARRI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
APIAQVDVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRIAQGFDTLL
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
KTALAGKGAMPPRGGTNPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQPASGAAG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
ASGAADAASAQIAAAQAAIAAIPKAGEKPAAAPTSADAASAGKALYTQVCQACHAAGVLG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
APKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]