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The map label for this gene is yhfM [C]

Identifier: 161523306

GI number: 161523306

Start: 139375

End: 140760

Strand: Direct

Name: yhfM [C]

Synonym: Bmul_0126

Alternate gene names: 161523306

Gene position: 139375-140760 (Clockwise)

Preceding gene: 161523305

Following gene: 161523307

Centisome position: 4.04

GC content: 66.23

Gene sequence:

>1386_bases
ATGAAAGCAGAGTCGAAAGGCCAGCCCGCGCTGCAGCAGACGCTCGGCACCTGGCAACTGTGGGGCATCGCGGTCGGCCT
CGTGATCTCCGGCGAATACTTCGGCTGGAGCTACGGGTGGGCCAGCGCCGGCACGCTGGGTTTCGTGATCACCGCGCTGT
TCGTCGCGGCGATGTATACGACCTTCATCTTCAGCTTCACCGAACTGACGACGTCGATCCCGCATGCGGGCGGCCCGTTC
GCGTACGCGCGCCGCGCGTTCGGCCCGACCGGCGGCTATCTGGCCGGCGTCGCGACGCTCGTCGAGTTCGTGTTCGCGCC
GCCCGCGATCGCGCTCGCGATCGGCGCGTATCTGCACGTGCAGTTTCCGGGGCTCGAACCGAAACACGCGGCGATGGGCG
CCTATCTCGTGTTCATGGCGCTGAACATTGTCGGCGTGCAGATCGCCGCCACGTTCGAACTGGTCGTCACGCTGCTCGCG
ATCTTCGAATTGCTCGTGTTCATGGGCGTCGTGTCGCCGGGCTTCGCGTGGAGCAATTTCACGAAGGGCGGCTGGGCGGG
CGCCGACCATTTCAGCGTCGGCGCATTCCACGGGATGTTCGCGGCGATCCCGTTCGCGATCTGGTTCTTCCTCGCGATCG
AAGGCGTCGCGATGGCGGCCGAGGAAGCAAAGAATCCGAAGCGCTCGATTCCGGTCGCGTACGTCGCGGGGATCCTCACG
CTCGTCGCGCTCGCGATCGGCGTGATGGTGTTCGCGGGCGGCGCAGGCGACTGGACCAAGCTCGCGAACATCAACGACCC
GCTGCCGCAGGCGATGAAGTACATCGTCGGCGCGAACAGCGGCTGGATGCACATGCTCGTCTGGCTCGGGCTGTTCGGGC
TCGTCGCGTCGTTCCACGGGATCATCCTCGGCTATTCGCGCCAGATCTTCGCGCTCGCCCGCGAAGGCTACCTGCCGGAA
TGGCTCGCGAAGGTCCATCCGCGCTTTCGCACGCCTTACCGCGCGATTCTCGCCGGCGGCGTGGTCGGCATCGCGGCGAT
CTACAGCGACGAGCTGATCCAGTTCGGCGGCCAGACGCTGACCGCGAATATCGTGACGATGTCGGTGTTCGGTGCGATCG
TGATGTATATCGTCAGCATGGCCGCGCTGTTCAAGCTGCGCCGTTCGCAGCCGAACCTCGCGCGGCCGTTCCGTGCGCCG
CTGTATCCGCTGTTCCCGGCGTTCGCGATCGTCGCGGCGCTCGTCTGTCTCGGTACGATGGTGTACTTCAACGGCCTCGT
CGCGCTGGTGTTCGTCGTGTTCCTCGCGCTCGGCTACGCGTACTTCCTCGCGACGCGCGCGCAGCGCGCGGCGAACGCAC
CGGCCGACGCGCTGCTGGAGGATTGA

Upstream 100 bases:

>100_bases
GCCGTCTTTGCCGAATTTCGATAACACGTCGAATAATGACTCTCTAGCATCGATTCTCAGTCGCGCGGGACGCACGCCTC
GCGCTTTTGAGGAGAGTCCG

Downstream 100 bases:

>100_bases
GCATGACGAAGCTGAACGGCCGTTTCTGACGGCATCGGCGCGCCCCGGTCGCAGCGGGCGCGCCGCCGGTTTTTGCAAGG
AGACACGCACGATGTCCTAC

Product: ethanolamine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKAESKGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPF
AYARRAFGPTGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLA
IFELLVFMGVVSPGFAWSNFTKGGWAGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPVAYVAGILT
LVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPE
WLAKVHPRFRTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLARPFRAP
LYPLFPAFAIVAALVCLGTMVYFNGLVALVFVVFLALGYAYFLATRAQRAANAPADALLED

Sequences:

>Translated_461_residues
MKAESKGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPF
AYARRAFGPTGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLA
IFELLVFMGVVSPGFAWSNFTKGGWAGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPVAYVAGILT
LVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPE
WLAKVHPRFRTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLARPFRAP
LYPLFPAFAIVAALVCLGTMVYFNGLVALVFVVFLALGYAYFLATRAQRAANAPADALLED
>Mature_461_residues
MKAESKGQPALQQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPF
AYARRAFGPTGGYLAGVATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLA
IFELLVFMGVVSPGFAWSNFTKGGWAGADHFSVGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPVAYVAGILT
LVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPE
WLAKVHPRFRTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLARPFRAP
LYPLFPAFAIVAALVCLGTMVYFNGLVALVFVVFLALGYAYFLATRAQRAANAPADALLED

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI7657683, Length=384, Percent_Identity=25.78125, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI4507047, Length=244, Percent_Identity=29.0983606557377, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI187423910, Length=488, Percent_Identity=22.7459016393443, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI7657591, Length=488, Percent_Identity=22.7459016393443, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI87082250, Length=462, Percent_Identity=25.5411255411255, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081869, Length=383, Percent_Identity=23.4986945169713, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI87082023, Length=339, Percent_Identity=26.5486725663717, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI2367353, Length=368, Percent_Identity=26.3586956521739, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081708, Length=475, Percent_Identity=22.7368421052632, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786789, Length=386, Percent_Identity=22.279792746114, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786302, Length=477, Percent_Identity=23.6897274633124, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790653, Length=367, Percent_Identity=22.6158038147139, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17540018, Length=461, Percent_Identity=24.0780911062907, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17568033, Length=440, Percent_Identity=25, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17532491, Length=509, Percent_Identity=23.5756385068762, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281366235, Length=361, Percent_Identity=24.9307479224377, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007820, Length=361, Percent_Identity=24.9307479224377, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24667468, Length=364, Percent_Identity=23.6263736263736, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221512776, Length=430, Percent_Identity=23.0232558139535, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666159, Length=430, Percent_Identity=23.0232558139535, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007818, Length=362, Percent_Identity=24.8618784530387, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85725152, Length=362, Percent_Identity=24.8618784530387, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 49323; Mature: 49323

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]