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The map label for this gene is tctD [H]

Identifier: 161523255

GI number: 161523255

Start: 81392

End: 82084

Strand: Reverse

Name: tctD [H]

Synonym: Bmul_0075

Alternate gene names: 161523255

Gene position: 82084-81392 (Counterclockwise)

Preceding gene: 161523257

Following gene: 161523254

Centisome position: 2.38

GC content: 65.22

Gene sequence:

>693_bases
ATGCGACTCCTTCTGATCGAAGACGACCGCCCCATCGCACGCGGTATCCAGAGCAGCCTCGAACAGGCTGGCTTCACCGT
CGACATGGTGCACGACGGCATCTTTGCCGAACAGGCGCTGGCACAAAACCGCCACGAACTCGTGATCCTCGACCTCGGCC
TGCCGGGCATCGACGGAATGACGCTGCTCACGCGCTTTCGCCAGACCAACCGCCACACGCCCGTCATCGTGCTGACCGCG
CGCGACGAGCTGAACGACCGTATCCAGGGCCTGAACTCGGGCGCCGACGATTACATGCTGAAGCCGTTCGAACCGGCCGA
GCTCGAAGCGCGGATCCGCGCGGTCATGCGCCGCAGCGGCCCGCACAGCGACATGCCGCGCCCGGAAGTATCGCTCGGCG
GCGTCCGCCTGTCGGGCGTCGATCGCCGTATCTTCAACGACGACAAGCCGCTCGAACTGTCGCCGCGCGAATTCGCGGTG
CTCGAGATGCTGCTGCTGCGTCACGGTCGCGTCGTCAGCAAGGCGCAGCTGCAGGATCACCTCACGCACTTCGGCGGCGA
TCTCGGCGACACCGCGATCGAAGTCTACGTGCACCGCGTGCGCAAGAAACTCGAACAGTGTCGCGTCGAAATCGTGACGG
TGCGCGGCTTCGGCTATCTGCTGCAGGAAATCCGCCAGACGGCCAGCGTCTGA

Upstream 100 bases:

>100_bases
CCGCCATGCTTGATTGTCACGCGATGCGGCGGCCCTGTGGAAACGGCGTCGTGCTGTCCGCGTGCCTGAACCGCCAACCC
ATTGTACTTGAGCGAACTTC

Downstream 100 bases:

>100_bases
GCGGCACCGCCGTCGCCGGCGCGCCGCGTGCAGGCAGGCCGGCGGGCCGGCTCGCCGCGCGGCGTCGCCGCCCGGCGCAC
GACCGCGCCGCTCCGTCGTC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGMTLLTRFRQTNRHTPVIVLTA
RDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSGPHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAV
LEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV

Sequences:

>Translated_230_residues
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGMTLLTRFRQTNRHTPVIVLTA
RDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSGPHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAV
LEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV
>Mature_230_residues
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGMTLLTRFRQTNRHTPVIVLTA
RDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSGPHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAV
LEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV

Specific function: Transcriptional activator of the tctI tricarboxylate transport system operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=38.9140271493213, Blast_Score=163, Evalue=9e-42,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=41.2556053811659, Blast_Score=160, Evalue=4e-41,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=34.6491228070175, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=38.1165919282511, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=31.25, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=34.375, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=35.8744394618834, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=33.920704845815, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=34.4978165938865, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=31.6964285714286, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI2367329, Length=235, Percent_Identity=36.1702127659575, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=29.646017699115, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=28.3185840707965, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1790299, Length=102, Percent_Identity=31.3725490196078, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=30.8411214953271, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788713, Length=101, Percent_Identity=31.6831683168317, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=28.4552845528455, Blast_Score=61, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=101, Percent_Identity=34.6534653465347, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25976; Mature: 25976

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGM
CEEEEEECCCHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHHCCCCEEEEEECCCCCCCHH
TLLTRFRQTNRHTPVIVLTARDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSG
HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAVLEMLLLRHGRVVSKAQLQDH
CCCCCCCCCCEECCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
LTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV
HHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALAQNRHELVILDLGLPGIDGM
CEEEEEECCCHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHHCCCCEEEEEECCCCCCCHH
TLLTRFRQTNRHTPVIVLTARDELNDRIQGLNSGADDYMLKPFEPAELEARIRAVMRRSG
HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PHSDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAVLEMLLLRHGRVVSKAQLQDH
CCCCCCCCCCEECCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
LTHFGGDLGDTAIEVYVHRVRKKLEQCRVEIVTVRGFGYLLQEIRQTASV
HHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2666399; 11083839; 11677609 [H]