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The map label for this gene is rssA [H]

Identifier: 161523213

GI number: 161523213

Start: 39184

End: 40551

Strand: Reverse

Name: rssA [H]

Synonym: Bmul_0033

Alternate gene names: 161523213

Gene position: 40551-39184 (Counterclockwise)

Preceding gene: 161523214

Following gene: 161523212

Centisome position: 1.18

GC content: 69.88

Gene sequence:

>1368_bases
ATGGCGCACAGCCTGCGCGGACGGCTGCTGTGGTGGCTGCTGCTGCCGCTCGCGGTGTTCGTGCTGATCGCGGCCGCGAT
GGCCTACGACGCCGCGCGGCGCACCGCCGATCTCGTACAGGACAGCACGCTCGTCGCGTCCGCGCGCACGATCGGCGAGG
ACATCGAGTGGCGCAACGGGCTGCCCGTCGCCGACGTGCCGCCCGCCGCGCTCGAAATCTTCGAATCGCCGTCGCGCGAT
TCGGTGTTCTACAAGGTGATTGACGGCGACGGCCGTCTGCTGGCCGGCAATCCCGCGCTCGACGTCGTCGCGCGGCACGG
CGCCGAGCCCGTCTCGTACGACACGACGCTCGACGGCATGCGCTTGCGCGCCGTCGCCTACGACCGCCAGCTGTACGACG
AAGGCCAGGTCGATACGGTGACGGTCGTCGTCGCGAAGACGACGCGCTCGCGCAACGCGATGGTCGCGACGATCTGGCGG
CCGCAGCTCGTGCGGCTCGCGCTGATGCTGGTGCTCGCGGTCGCGCTCGTCTATCTCGGCCTCACGTTCGAGCTGCGGCC
GCTGATGAAGCTGAAGGACGATGTCGCCGATCGCGGGCCGATGGAGCTGGAGCCGATCCGTCCGGAGCGATTGCAGCATG
AGCTGCGGCCGATCGTCGACGCGATCAATCAGTGCATCGCGCGGCTGAACACGCACACGGCGACGCAGCGGCGCTTCATC
GCCGATGCCGCGCACCAGTTGCGCACGCCGATCGCGGTGCTCGACACGCAGATCCAGTATGCGCAGCAGCGCGGCAACGA
CGATCGCGAACTCGCGTCGGTGCTCGACAGCATGCAGCGCAGCAGCCGCAAGATGGCTGACGTGACCGACAAGCTGCTGC
TGCTCGCGCATGCGGAAGCGACGCCGTCGACGCTGTTGACGCAGCGCGTCGATCTGGCCGCGCTCGTGTCGAGCGTGCTC
GAGGAGACGATCGTGCTCGCGCAGCGGCGCGACATCGATCTCGGCGCCGAGCTCGGCGAGCGGCTCGACGTCGCGGGCAG
CGGCAGCCTGCTGAGTGCGCTCGTGACGAATCTCGTCGACAATGCGGTGCGCTACACGCAACCGGGCGGCTGTGTGACCG
TGGCTGCGCGGCGCGACGGCGACACGGTCGTGCTCGACGTGATCGACGACGGCCCCGGCATTCCGGCGGAAGCGCGGCCG
CACGTGTTCAAGCGCTTCTACCGCGTGTCGTCCGACACGGAAGGCTCGGGGCTCGGCCTCGCGATCGTCAGCGAGATCGC
GCAGGCGCACGGCGGCAGCGCGACGCTCGCGCCGGGACCCGGCAACCGCGGCGTCGTCGTGACGGTGCGGCTGCCTGCGT
ACGATTGA

Upstream 100 bases:

>100_bases
CCCGCCGCATTCTGAGCGCCGCCGTCACGTAGAACAGCACACCGCCACCGCGCCGGCCGCCCCGGCGCGGCGGCGTTTCG
AGCACAAGGAGCGACGATCG

Downstream 100 bases:

>100_bases
AGAGAACGCTGCGATGAAACTGCTGCTGGTCGAAGACAACGCCGAACTCGCGCACTGGATCGTGAACCTCTTGCGCGGCG
AGGATTTCGCGGTCGACTGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MAHSLRGRLLWWLLLPLAVFVLIAAAMAYDAARRTADLVQDSTLVASARTIGEDIEWRNGLPVADVPPAALEIFESPSRD
SVFYKVIDGDGRLLAGNPALDVVARHGAEPVSYDTTLDGMRLRAVAYDRQLYDEGQVDTVTVVVAKTTRSRNAMVATIWR
PQLVRLALMLVLAVALVYLGLTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNTHTATQRRFI
ADAAHQLRTPIAVLDTQIQYAQQRGNDDRELASVLDSMQRSSRKMADVTDKLLLLAHAEATPSTLLTQRVDLAALVSSVL
EETIVLAQRRDIDLGAELGERLDVAGSGSLLSALVTNLVDNAVRYTQPGGCVTVAARRDGDTVVLDVIDDGPGIPAEARP
HVFKRFYRVSSDTEGSGLGLAIVSEIAQAHGGSATLAPGPGNRGVVVTVRLPAYD

Sequences:

>Translated_455_residues
MAHSLRGRLLWWLLLPLAVFVLIAAAMAYDAARRTADLVQDSTLVASARTIGEDIEWRNGLPVADVPPAALEIFESPSRD
SVFYKVIDGDGRLLAGNPALDVVARHGAEPVSYDTTLDGMRLRAVAYDRQLYDEGQVDTVTVVVAKTTRSRNAMVATIWR
PQLVRLALMLVLAVALVYLGLTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNTHTATQRRFI
ADAAHQLRTPIAVLDTQIQYAQQRGNDDRELASVLDSMQRSSRKMADVTDKLLLLAHAEATPSTLLTQRVDLAALVSSVL
EETIVLAQRRDIDLGAELGERLDVAGSGSLLSALVTNLVDNAVRYTQPGGCVTVAARRDGDTVVLDVIDDGPGIPAEARP
HVFKRFYRVSSDTEGSGLGLAIVSEIAQAHGGSATLAPGPGNRGVVVTVRLPAYD
>Mature_454_residues
AHSLRGRLLWWLLLPLAVFVLIAAAMAYDAARRTADLVQDSTLVASARTIGEDIEWRNGLPVADVPPAALEIFESPSRDS
VFYKVIDGDGRLLAGNPALDVVARHGAEPVSYDTTLDGMRLRAVAYDRQLYDEGQVDTVTVVVAKTTRSRNAMVATIWRP
QLVRLALMLVLAVALVYLGLTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNTHTATQRRFIA
DAAHQLRTPIAVLDTQIQYAQQRGNDDRELASVLDSMQRSSRKMADVTDKLLLLAHAEATPSTLLTQRVDLAALVSSVLE
ETIVLAQRRDIDLGAELGERLDVAGSGSLLSALVTNLVDNAVRYTQPGGCVTVAARRDGDTVVLDVIDDGPGIPAEARPH
VFKRFYRVSSDTEGSGLGLAIVSEIAQAHGGSATLAPGPGNRGVVVTVRLPAYD

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=445, Percent_Identity=29.438202247191, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1786783, Length=252, Percent_Identity=34.9206349206349, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786600, Length=237, Percent_Identity=31.6455696202532, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1790551, Length=287, Percent_Identity=32.7526132404181, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1790861, Length=290, Percent_Identity=29.6551724137931, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=30.4878048780488, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1790346, Length=247, Percent_Identity=28.3400809716599, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1788279, Length=361, Percent_Identity=26.5927977839335, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787374, Length=297, Percent_Identity=24.5791245791246, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=25.8620689655172, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082128, Length=255, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787894, Length=219, Percent_Identity=29.6803652968037, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=26.8398268398268, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789808, Length=283, Percent_Identity=28.2685512367491, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788713, Length=247, Percent_Identity=22.6720647773279, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081816, Length=246, Percent_Identity=28.4552845528455, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=28.1938325991189, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789149, Length=231, Percent_Identity=25.974025974026, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49418; Mature: 49287

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSLRGRLLWWLLLPLAVFVLIAAAMAYDAARRTADLVQDSTLVASARTIGEDIEWRNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPVADVPPAALEIFESPSRDSVFYKVIDGDGRLLAGNPALDVVARHGAEPVSYDTTLDGM
CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCC
RLRAVAYDRQLYDEGQVDTVTVVVAKTTRSRNAMVATIWRPQLVRLALMLVLAVALVYLG
EEEHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHC
LTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNTHTATQRRFI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ADAAHQLRTPIAVLDTQIQYAQQRGNDDRELASVLDSMQRSSRKMADVTDKLLLLAHAEA
HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
TPSTLLTQRVDLAALVSSVLEETIVLAQRRDIDLGAELGERLDVAGSGSLLSALVTNLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
NAVRYTQPGGCVTVAARRDGDTVVLDVIDDGPGIPAEARPHVFKRFYRVSSDTEGSGLGL
HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
AIVSEIAQAHGGSATLAPGPGNRGVVVTVRLPAYD
HHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
AHSLRGRLLWWLLLPLAVFVLIAAAMAYDAARRTADLVQDSTLVASARTIGEDIEWRNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPVADVPPAALEIFESPSRDSVFYKVIDGDGRLLAGNPALDVVARHGAEPVSYDTTLDGM
CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCC
RLRAVAYDRQLYDEGQVDTVTVVVAKTTRSRNAMVATIWRPQLVRLALMLVLAVALVYLG
EEEHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHC
LTFELRPLMKLKDDVADRGPMELEPIRPERLQHELRPIVDAINQCIARLNTHTATQRRFI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ADAAHQLRTPIAVLDTQIQYAQQRGNDDRELASVLDSMQRSSRKMADVTDKLLLLAHAEA
HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
TPSTLLTQRVDLAALVSSVLEETIVLAQRRDIDLGAELGERLDVAGSGSLLSALVTNLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
NAVRYTQPGGCVTVAARRDGDTVVLDVIDDGPGIPAEARPHVFKRFYRVSSDTEGSGLGL
HHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
AIVSEIAQAHGGSATLAPGPGNRGVVVTVRLPAYD
HHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA