| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161510135
Identifier: 161510135
GI number: 161510135
Start: 2057689
End: 2058291
Strand: Reverse
Name: 161510135
Synonym: USA300HOU_1913
Alternate gene names: NA
Gene position: 2058291-2057689 (Counterclockwise)
Preceding gene: 161510136
Following gene: 161510134
Centisome position: 71.64
GC content: 32.17
Gene sequence:
>603_bases ATGTCATTCGTAACAGAAAATCCATGGTTAATGGTACTAACTATATTTATCATTAACATTTGTTATGTAACGTTTTTAAC GATGCGAACAATTTTAACGTTGAAAGGTTATCGTTATATTGCTGCATCAGTTAGTTTTTTAGAAGTATTAGTTTATATCG TTGGTTTAGGTTTGGTTATGTCTAATTTAGACCATATTCAAAATATTATTGCCTACGCATTTGGTTTTTCAATAGGTATC ATTGTTGGTATGAAAATAGAAGAAAAACTGGCATTAGGTTATACAGTTGTAAATGTAACTTCAGCAGAATATGAGTTAGA TTTACCGAATGAACTTCGAAATTTAGGATATGGCGTTACGCACTATGCTGCGTTTGGTAGAGATGGTAGTCGTATGGTGA TGCAAATTTTAACACCAAGAAAATATGAACGTAAATTGATGGATACGATAAAAAATTTAGATCCGAAAGCATTTATCATT GCGTATGAACCTCGAAACATACATGGTGGATTCTGGACTAAAGGCATTCGTCGTAGAAAGCTTAAAGATTATGAACCAGA AGAACTGGAAAGTGTAGTAGAACATGAAATTCAAAGTAAATGA
Upstream 100 bases:
>100_bases ATGAGAGTTTTCGTACTATATTATATTAATATGCATTCATTAAGGTTAGGTTGAAGCAGTTTGGTATTTAAAGTGTAATT GAAAGAGAGTGGGGCGCCTT
Downstream 100 bases:
>100_bases GAATGAAACAATTGCTGATTGTTTGTCACGAATGAAAATGCAAGGGTATATGCCGGTAAAACGTATTGAAAAACCCGTGT TTCAAGAGCAAAAAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGI IVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFII AYEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK
Sequences:
>Translated_200_residues MSFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGI IVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFII AYEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK >Mature_199_residues SFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVMSNLDHIQNIIAYAFGFSIGII VGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVTHYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIA YEPRNIHGGFWTKGIRRRKLKDYEPEELESVVEHEIQSK
Specific function: Unknown
COG id: COG4843
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0316 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019264 - InterPro: IPR022930 [H]
Pfam domain/function: PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 22969; Mature: 22838
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCEEECCHHHHHHCCCCHH HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH LKDYEPEELESVVEHEIQSK CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEECCCEEECCHHHHHHCCCCHH HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK HHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH LKDYEPEELESVVEHEIQSK CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]