| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
Click here to switch to the map view.
The map label for this gene is camS [H]
Identifier: 161510126
GI number: 161510126
Start: 2046881
End: 2048086
Strand: Reverse
Name: camS [H]
Synonym: USA300HOU_1904
Alternate gene names: 161510126
Gene position: 2048086-2046881 (Counterclockwise)
Preceding gene: 161510127
Following gene: 161510124
Centisome position: 71.29
GC content: 30.68
Gene sequence:
>1206_bases ATGTCGATGAAGCGTACATTAGTATTATTGATTACAGCTATCTTTATACTCGCTGCTTGTGGTAACCATAAGGATGACCA GGCTGGAAAAGATAATCAAAAACATAACAATAGTTCAAATCAAGTAAAAGAAATTGCAACGGATAAAAATGTACAAGGTG ATAACTATCGTACATTGTTACCATTTAAAGAAAGCCAGGCAAGAGGACTTTTACAAGATAACATGGCAAATAGTTATAAT GGCGGCGACTTTGAAGATGGTTTATTGAACTTAAGTAAAGAAGTATTTCCAACAGATAAATATTTGTATCAAGATGGTCA ATTTTTGGACAAGAAAACAATTAATGCCTATTTAAATCCTAAGTATACAAAACGTGAAATCGATAAAATGTCTGAAAAAG ATAAAAAAGACAAGAAAGCGAATGAAAATTTAGGACTTAATCCATCACACGAAGGTGAAACAGATCCTGAAAAGATTGCA GAAAAATCACCAGCCTATTTATCTAACATTTTAGAGCAAGATTTTTATGGTGGTGGAGATACAAAAGGTAAGAATATTAA AGGTATGACGATTGGTTTAGCTATGAATAGTGTTTATTACTATAAAAAAGAAAAAGATGGATCGACTTTTAGTAAAAAAC TAGATGATAGCGAAGTTAAAAAGCAAGGTAAACAAATGGCTAGTGAGATATTATCAAGGTTACGTGAAAATGATGATTTA AAAGATATACCAATTCATTTTGCAATTTATAAGCAATCAAGTGAAGATTCAATCACACCAGGTGAATTTATCACTCAAGC GACTGCAGAAAAGAGTCAAACAAAGCTTAATGAATGGCATAATATCAATGAAAAATCAGCTTTATTACCTTCTTCAACAG CAGCAGATTATGATGAAAATTTAAATAATAATTTCAAGCAATTTAATGATAATTTGCAATCATATTTTTCTAATTTCACA CAAGCAGTAGGGAAAGTTAAATTTGTTGATAAAAAGCCACAACGATTAGTAGTAGATTTACCAATCGATTACTATGGACA AGCTGAAACAATTGGTATTACACAGTACGTTACTGAACAAGCGAATAAATATTTCGATAAAATCGATAACTATGAAATTC GTATTAAAGATGGTAACCAACCACGTGCTTTAATTAGTAAGACAAAAGATGACAAAGAACCGCAAGTTCATATTTACAGT AATTAA
Upstream 100 bases:
>100_bases TGCAGGTTCAAAATTAACAAAAGCACAAAGTTTAGGTATTGAAATTTGGACAGAGCAACAATTTGTAGATAAGCAAAATG AATTAAATAGTTAGAGGGGT
Downstream 100 bases:
>100_bases TTGTAAATTAAAGATAATAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACATTAGTACCTTTTTAATTTGTTAAGA CTTATGAATTATTTTTCTCT
Product: pheromone lipoprotein CamS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSMKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYN GGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIA EKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVKKQGKQMASEILSRLRENDDL KDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFT QAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYS N
Sequences:
>Translated_401_residues MSMKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYN GGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIA EKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVKKQGKQMASEILSRLRENDDL KDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFT QAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYS N >Mature_400_residues SMKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNG GDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAE KSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVKKQGKQMASEILSRLRENDDLK DIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQ AVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN
Specific function: Unknown
COG id: COG4851
COG function: function code R; Protein involved in sex pheromone biosynthesis
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011426 [H]
Pfam domain/function: PF07537 CamS [H]
EC number: NA
Molecular weight: Translated: 45599; Mature: 45468
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEC PFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNP CCCHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCC KYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEKSPAYLSNILEQDFYGGGD CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCC TKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVKKQGKQMASEILSRLRENDDL CCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC KDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDEN CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHH LNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQ HCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCCCCCEEHHHHHHHHH ANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN HHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure SMKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEC PFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNP CCCHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCC KYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEKSPAYLSNILEQDFYGGGD CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCC TKGKNIKGMTIGLAMNSVYYYKKEKDGSTFSKKLDDSEVKKQGKQMASEILSRLRENDDL CCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC KDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDEN CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHH LNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQ HCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCCCCCEEHHHHHHHHH ANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN HHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9701819; 9384377 [H]