| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161510062
Identifier: 161510062
GI number: 161510062
Start: 1979634
End: 1980758
Strand: Reverse
Name: 161510062
Synonym: USA300HOU_1839
Alternate gene names: NA
Gene position: 1980758-1979634 (Counterclockwise)
Preceding gene: 161510063
Following gene: 161510061
Centisome position: 68.95
GC content: 29.78
Gene sequence:
>1125_bases ATGAATGCACTATTTATTATCATATTTATGATTGTAGTAGGGGCGATAATTGGTGGCATTACTAATGTAATTGCAATTAG AATGCTGTTTCACCCCTTTAAACCATACTATATATTTAAATTTAGAGTCCCATTTACACCAGGTTTAATACCGAAAAGAC GCGAAGAAATTGCAACTAAAATTGGCCAAGTGATTGAAGAGCATTTGCTTACAGAAACTTTAATTAATGAAAAATTGAAA AGCGAGCAATCACAGCAAGCAATAGAATCTATGATTCAACAGCAGTTACAAAAGTTGACGAAAGATCAATTGTCAATAAA ACAAATTACTTCTCAAATCGATATTGATTTAGAACAAGTATTACAAACTAATGGAAATCAATATATTGAATCACAATTGA ATAATTATTATACAAAGCATCAAAACCAAACAATAGCATCTTTATTGCCAAATCAACTTGTAACATTTTTAAATCAGCAT GTAGATAACGCAACAGACTTATTATGTGATCGTGCAAGGAATTATTTATCATCTGCAAAAGGCACACAAGATATTAATGA TATGTTGGATACTTTTTTCAATGAGAAAGGTAAGTTAATTGGTATGTTGCAAATGTTTATGACAAAAGAGAGTATTGCAG ATCGCATTCAACAAGAACTTATACGTTTAACATCTCATCCTAAAGCAAGAACAATTGTGACATCGTTAATTACCAATGAA TATCAAACTTTTAAAGATAAACCATTGAATGAACTGTTAGATGCATCGCAGTTTAATGAAATCGCTGAAAATCTATCAGT GTATGTAACAACATATGCAAGCAAACAAGCGAATAAGCCAGTGGTTACGTTAATGCCTCAATTCGTTGATTATTTAGAAG GTCAACTCTCTAGCAAATTAGCAAATTTAATCATTGAAAAATTATCGATTCACTTATCTACAATTATGAAAAAAGTGGAT TTACGAGGATTAATTGAAGAACAAATTAATACGTTTGACTTAGATTATATTGAAAAATTAATTATAGAAATTGCTAACAA AGAACTAAAGTTGATTATGTCATTAGGTTTCATTTTAGGTGGTATTATTGGATTTTTCCAAGGTTTGGTTGCAATCTTTG TCTAA
Upstream 100 bases:
>100_bases AACTAATAATAAATTGAGCAGAAAGTGAAATGATTAATGAATTAAAAAATAAAAATAGTGGTATAATGAATAACTATGTT GTCACAAAGGAGTCAAAATT
Downstream 100 bases:
>100_bases AAAAGCGAGATGTGGTAAAGTAATATCGAACGTTTTAATAAACATCACAACAAAGGAGTGCTATAACCATGGCAGTAAAT TTATATGATTATGCAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLK SEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQH VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNE YQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQANKPVVTLMPQFVDYLEGQLSSKLANLIIEKLSIHLSTIMKKVD LRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV
Sequences:
>Translated_374_residues MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLK SEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQH VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNE YQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQANKPVVTLMPQFVDYLEGQLSSKLANLIIEKLSIHLSTIMKKVD LRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV >Mature_374_residues MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLK SEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQVLQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQH VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNE YQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQANKPVVTLMPQFVDYLEGQLSSKLANLIIEKLSIHLSTIMKKVD LRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 42696; Mature: 42696
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH IGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQHVDNATDLLCDRARNYLSSAK HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC GTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQANKPVVTLMPQFVDYLEGQLSSKL HHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHH ANLIIEKLSIHLSTIMKKVDLRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIIGFFQGLVAIFV HHHHHHHHHHHHHC >Mature Secondary Structure MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVPFTPGLIPKRREEIATK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH IGQVIEEHLLTETLINEKLKSEQSQQAIESMIQQQLQKLTKDQLSIKQITSQIDIDLEQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQTNGNQYIESQLNNYYTKHQNQTIASLLPNQLVTFLNQHVDNATDLLCDRARNYLSSAK HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC GTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQELIRLTSHPKARTIVTSLITNE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YQTFKDKPLNELLDASQFNEIAENLSVYVTTYASKQANKPVVTLMPQFVDYLEGQLSSKL HHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHH ANLIIEKLSIHLSTIMKKVDLRGLIEEQINTFDLDYIEKLIIEIANKELKLIMSLGFILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIIGFFQGLVAIFV HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]