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The map label for this gene is 161509960

Identifier: 161509960

GI number: 161509960

Start: 1864819

End: 1865661

Strand: Reverse

Name: 161509960

Synonym: USA300HOU_1733

Alternate gene names: NA

Gene position: 1865661-1864819 (Counterclockwise)

Preceding gene: 161509961

Following gene: 161509959

Centisome position: 64.94

GC content: 30.96

Gene sequence:

>843_bases
ATGAGAGATAAATTAAAGGAACGTTTAAGCCATTTAGACGTTGATTTTAAATTTAATCGTGAAGAAGAAACTTTGCGTAT
TTATCGAACAGATAATAACAAAGGTATCACGATTAAACTTAACGCTATAGTCGCAAAATATGAAGATAAAAAAGAAAAAA
TTGTAGATGAAATTGTTTATTACGTTGATGAAGCTATTGCACAAATGGCAGATAAAACCCTTGAGAGTATATCATCTAGT
CAAATTATGCCTGTCATTAGAGCGACTAGCTTTGATAAAAAAACTAAACAAGGTGTTCCTTTTATCTATGATGAGCATAC
TGCAGAAACAGCAGTTTATTATGCAGTCGATTTAGGGAAATCATATCGTCTAATTGACGAAAGCATGTTAGAGGATTTGA
AGTTAACTGAACAACAAATAAGAGAAATGTCTCTGTTTAATGTTAGAAAATTGTCAAATTCATATACGACTGATGAAGTA
AAAGGTAATATTTTTTATTTTATTAACTCAAATGACGGGTATGATGCAAGTAGGATACTAAATACTGCATTTTTAAATGA
AATTGAGGCACAATGTCAAGGCGAAATGCTCGTAGCAGTGCCACACCAAGATGTGTTAATTATTGCAGATATACGCAATA
AAACAGGATATGATGTGATGGCACATTTAACAATGGAATTTTTCACTAAAGGTCTAGTTCCAATTACATCATTATCCTTT
GGATATAAACAGGGTCATCTTGAACCGATATTTATTTTAGGTAAAAATAATAAACAAAAAAGAGATCCAAACGTGATTCA
GCGTTTAGAAGCAAATCGTCGTAAATTTAATAAAGATAAATAG

Upstream 100 bases:

>100_bases
AAACGGGGTAATACTCGTTTTTCTCTGTTACTATGTGTTGATTTATTGTAAACTATTATAAGGTGCGAAATTAGGAGTGT
TACATATGAATACCTTTCAA

Downstream 100 bases:

>100_bases
AAATAATTGGATAAGGAGTTTTGTCATAATGAATTTATTTTACAATCCTAAATATGTAGGAGATGTCGCATTTTTACAAA
TTGAACCAGTTGAAGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSS
QIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEV
KGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSF
GYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK

Sequences:

>Translated_280_residues
MRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSS
QIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEV
KGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSF
GYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
>Mature_280_residues
MRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIVDEIVYYVDEAIAQMADKTLESISSS
QIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYAVDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEV
KGNIFYFINSNDGYDASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSF
GYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK

Specific function: Unknown

COG id: COG4848

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0354 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1564_STAAN (Q7A528)

Other databases:

- EMBL:   BA000018
- PIR:   C89959
- RefSeq:   NP_374853.1
- STRING:   Q7A528
- EnsemblBacteria:   EBSTAT00000000047
- GeneID:   1124410
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1564
- eggNOG:   COG4848
- GeneTree:   EBGT00050000025204
- HOGENOM:   HBG314016
- OMA:   IYPVIRS
- ProtClustDB:   PRK13668
- BioCyc:   SAUR158879:SA1564-MONOMER
- HAMAP:   MF_01548
- InterPro:   IPR010838
- PIRSF:   PIRSF012562

Pfam domain/function: PF07285 DUF1444

EC number: NA

Molecular weight: Translated: 32448; Mature: 32448

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIVDEIVY
CCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHHH
YVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYAVDLGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCEEEECCCCCEEEEEEEECCC
SYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYDASRIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHH
NTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSF
HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHCCC
GYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIVDEIVY
CCHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCEEEEEEEEEEEHHHHHHHHHHHHHH
YVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYAVDLGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCEEEECCCCCEEEEEEEECCC
SYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYDASRIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHH
NTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPITSLSF
HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEHHCCC
GYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146