| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161509684
Identifier: 161509684
GI number: 161509684
Start: 1586605
End: 1587042
Strand: Reverse
Name: 161509684
Synonym: USA300HOU_1455
Alternate gene names: NA
Gene position: 1587042-1586605 (Counterclockwise)
Preceding gene: 161509685
Following gene: 161509683
Centisome position: 55.24
GC content: 32.19
Gene sequence:
>438_bases ATGGGGAACACAATATATGATATCAAGCCAGGCACATTTAAATATATTGAATCAGAAATATATAATTTAAATGAGAACAA GAAAGAAATAAAAAGATTGAGGTTGGAAATACTTAATCCAACGAAGGAACAAGATTCCAATATTGTATATGGACCATTAC AAAAAGGCGAACCAGTTAGAACAACTGAACTAATGGCAACTAGATTATTAACTAATAAGATGTTACGAAACCTTGAAGAA ATGGTCGAAGCAGTTGAGAGTGAATACTTAAAGTTGCCTGAAGATCATAAGAAAGTAATAAGGCTCAAGTATTGGAATAA AGAAAAGAAGTTAAAGATGGAACAGATAGGACATGAATGCCATATGCATCGTAATACTGTTACTACTATACGAAAGAACT TTGTTAAAGCGGTAGCGTATCATGCAGGTATCAAATAA
Upstream 100 bases:
>100_bases AAGAGTATATAAAGCTTTACAAAATAAAGAACTAACGCAAGAAGAATTAATGAAAGCTATTAAAGCAAGAATAGCTAAGC ATAAGTAATGGAGGTCTAAC
Downstream 100 bases:
>100_bases CATTGTGCAAAGATTGTGCAAAAGGCCTACAAATCTGTAGTAATATGATAGTATCGGAAAGATGTATAAAGTTATCTAAA AGTTATACGACACAAGTACA
Product: bacteriophage transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEE MVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHECHMHRNTVTTIRKNFVKAVAYHAGIK
Sequences:
>Translated_145_residues MGNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEE MVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHECHMHRNTVTTIRKNFVKAVAYHAGIK >Mature_144_residues GNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVRTTELMATRLLTNKMLRNLEEM VEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHECHMHRNTVTTIRKNFVKAVAYHAGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17159; Mature: 17028
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVR CCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCH TTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH HMHRNTVTTIRKNFVKAVAYHAGIK HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNTIYDIKPGTFKYIESEIYNLNENKKEIKRLRLEILNPTKEQDSNIVYGPLQKGEPVR CCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCH TTELMATRLLTNKMLRNLEEMVEAVESEYLKLPEDHKKVIRLKYWNKEKKLKMEQIGHEC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH HMHRNTVTTIRKNFVKAVAYHAGIK HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA