| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
Click here to switch to the map view.
The map label for this gene is 161509299
Identifier: 161509299
GI number: 161509299
Start: 1132521
End: 1132910
Strand: Reverse
Name: 161509299
Synonym: USA300HOU_1060
Alternate gene names: NA
Gene position: 1132910-1132521 (Counterclockwise)
Preceding gene: 161509302
Following gene: 161509293
Centisome position: 39.43
GC content: 29.74
Gene sequence:
>390_bases ATGAAACAAACATTTATTACACTTGGTGAAGGTCTAACAGATTTGTTCGAATTCATGACGATGATTGAATATAACCATCA ACGTATTGATAAAATTATCTATTTTCATTCACCACAAGCTGAAAATAAAAAGTCATCTGTAGCAATCATTATGAACCCTA CAACTGGCAATCATTTCCAAGCATTTTATATCATGATAAACGCTATTAAATATCCATATCCAGATTCAAATAAAAAGTTT CAAATGATAAATGATTGTGCTGAAAAATTCGACATACCAATTTTAGGTATCGATGTACAGCCCCCTCAAGCATTTCATGA TTTATCGTTATATTATAATTATTTAATTAGTGTGTTAAGGCTCCAAAAATGGATACCAGAACTTCAATAA
Upstream 100 bases:
>100_bases TACTTTTATGTTTACCTGCAATGACGCGCATGTTGTTCACACTTCCAATTCATTTAGTTATTTAATATAATTTATTGAGA AAAAGGAGAATGATAAACCA
Downstream 100 bases:
>100_bases TATTAATTATATATTTCGTGTTTCTCTTTTTCGTAAGTTTTCTTTAAGTATTTATATGGTGAGCCATCAATGTGTCTAAC GTATTTAAGTTGCATTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKF QMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLRLQKWIPELQ
Sequences:
>Translated_129_residues MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKF QMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLRLQKWIPELQ >Mature_129_residues MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKF QMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLRLQKWIPELQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15186; Mature: 15186
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQ CCCCEEECCCCHHHHHHHHHHHHHCHHHHHEEEEEECCCCCCCCCCEEEEECCCCCCHHH AFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLR HHHHEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LQKWIPELQ HHHHCCCCC >Mature Secondary Structure MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQ CCCCEEECCCCHHHHHHHHHHHHHCHHHHHEEEEEECCCCCCCCCCEEEEECCCCCCHHH AFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLR HHHHEEEHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LQKWIPELQ HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA