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The map label for this gene is 161509068

Identifier: 161509068

GI number: 161509068

Start: 882554

End: 883123

Strand: Reverse

Name: 161509068

Synonym: USA300HOU_0827

Alternate gene names: NA

Gene position: 883123-882554 (Counterclockwise)

Preceding gene: 161509069

Following gene: 161509067

Centisome position: 30.74

GC content: 31.23

Gene sequence:

>570_bases
GTGAACTATATTAAACGAACGATAATTTTACTTATATTATTCGTTGTCGTATCCCCAATAAACTCACCAAAAACAATTGC
AGATAATAAGTATTCAGAAATTCAAGATGACAAATTCCAATTACAACCTGGTGATATTATTGTTACAAAAGGCCCTGTCA
TGTGGGGATTTTTTGGTCATTGTAGTATCGCGATTGATGATAAAACGATTTTACAAATTGAGGGGCCTGGCGACAAACCA
ACTACACAATCCTTCGAATCTTTTAAATATAATTATGCAAGTGGCAAAAATGATTGGATGAAAGTTTATCGTTGCAGCTA
TCCTGGTGCAGGTAAAAAAGCGGCTGAATGGGTTAAGAAAAACTATGAGAATACAAATCATCGTTATCTAGTTACATTAA
ATTTGAACAGCAAAAAATTTACGTATTGTACTAAAATTATCTACCAAGCTTATAAATTTGGTGTAAGTGAAAAATCAGTT
AAAAGTTATGGACTACATATTATTTCACCCTATGCAATTAAAGATAATTTTATAGATCCATACAAACTAAGGCTTGTTAA
AGCTTATTAA

Upstream 100 bases:

>100_bases
CTTTAATATTTAAGATATGTTTTAGTCTTACAAGCTTATTAAAGATTACAATTCTAATTTAAGACTATTTACATATATTT
CTTCAACAAGGAGCTTTTAA

Downstream 100 bases:

>100_bases
CACAGTTTCATCAAATAGTTAAATTAGTTTGTGTTTTGCAATAAATTGGGTATAGATTACAAATGATATTTCAGGAGGCC
CAATATTTTGAATGAACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF 2 [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGHCSIAIDDKTILQIEGPGDKP
TTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSV
KSYGLHIISPYAIKDNFIDPYKLRLVKAY

Sequences:

>Translated_189_residues
MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGHCSIAIDDKTILQIEGPGDKP
TTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSV
KSYGLHIISPYAIKDNFIDPYKLRLVKAY
>Mature_189_residues
MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGHCSIAIDDKTILQIEGPGDKP
TTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKKNYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSV
KSYGLHIISPYAIKDNFIDPYKLRLVKAY

Specific function: Possibly involved in pGI2 replication mechanism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21755; Mature: 21755

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEECE
CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
EEEEECCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECEEECCCCCCH
YKLRLVKAY
HHEEEEECC
>Mature Secondary Structure
MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEECE
CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
EEEEECCCEEEEEECCCCCCCCCCHHHEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECEEECCCCCCH
YKLRLVKAY
HHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3211758 [H]