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The map label for this gene is yddB [H]

Identifier: 161508877

GI number: 161508877

Start: 690766

End: 691821

Strand: Reverse

Name: yddB [H]

Synonym: USA300HOU_0634

Alternate gene names: 161508877

Gene position: 691821-690766 (Counterclockwise)

Preceding gene: 161508878

Following gene: 161508876

Centisome position: 24.08

GC content: 26.52

Gene sequence:

>1056_bases
ATGAAAATAATAAGCAAGTACATTTTAACACGATTTTCTAAAAACGGAAAGCATTTTGATATTCCTAAAGAACAACGCCG
AGTAATTCCAAAATTTAAAAATCGTCGTAAGATGATTGTAATTTGTTTTTACTCATTATTAGCTATTTTGTTAATTCTTT
TATTAGCTTCTTTTATTAAAGCTACAAGAGCAAATAATGACAGTAAAGAAGCAGTTAATAAAACGAATATGATTCAAAAA
AAGTATGAAGATAATGCGAATACAGTTCAGTATAGTCCTAAATTAAAGTTATATGCTGATAAGTTTATTGATACGTATAT
GAATATCTCGAAAGATTCAAAAGAATTGGAATCTAGAGAAAAAGAATTGTTGAAATATTTTCCATCAGATTATAAAAAAC
CTGATGAAAAAATTTCAGATACAGAACGAAAATTGAATAGTAAAGAATTTTATAATATTAAACGTAAAGATAAACAAACA
ATTATACAGTATATTGTTAATTATGATGTGAATATTACTGAAAAGAAAGAAGTTAAAGTTAAGAAGAAAAAGAAAAGTGA
AAAAGATAAAGATGAGTATGAAACAAAAACAGAAGAAAAGCAACGTAAAGTAAATCAAAACATTTTAATAAATATACCTA
TTAAGAGTGAAAATAATAAGTATGTTGTTGTTGAATATCCTTATTTTACGCCAATCCCTGATAGTCAATTGAATCAAGCT
AAAATGGTTGAGGATAATTTGAAAGACAATAAACGGGAAGACAATCCGAAAGCAAAAGCTTTTATTGAAGATTTCTTTAA
TAAATATGCTTCTAGTAAGTCTGATGATATGGCCTATTTAATGGATAACCCTGAGGGCTTAGAAGGAACTAGAGAAGTTT
CTCAGATAAGAGAAATTAGGTTATATCCAAAAGGCGATGATTATGTTGCTAAAGTTGAAATTTTGATGAAAGATAAAGAT
TCTCCTTTGGAGAATTTGGAGCATTACACATTAGATATAACAAAAAAAGATGGTAAATATTACGTTAAAAATATGACTAA
TTCTATTGGAGGTTAA

Upstream 100 bases:

>100_bases
TTTAAAACAAAAAAAGCACTTATCAAAAGATAAGTGTTAAAAAAATAACTGGGATGTGATTTTTATTAAAAATTTCGTAA
AGGATTTTAGAAAATCGTTT

Downstream 100 bases:

>100_bases
TGTTATGAGTGGTTTATTTAATTTTTTTGTTTTAGGTGCTGACCGTCCATCACTTGGTGGAGTTGGTGACTGGATAAGTA
ATGAAGTAGGTACGGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFYSLLAILLILLLASFIKATRANNDSKEAVNKTNMIQK
KYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKELESREKELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQT
IIQYIVNYDVNITEKKEVKVKKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTPIPDSQLNQA
KMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEGTREVSQIREIRLYPKGDDYVAKVEILMKDKD
SPLENLEHYTLDITKKDGKYYVKNMTNSIGG

Sequences:

>Translated_351_residues
MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFYSLLAILLILLLASFIKATRANNDSKEAVNKTNMIQK
KYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKELESREKELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQT
IIQYIVNYDVNITEKKEVKVKKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTPIPDSQLNQA
KMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEGTREVSQIREIRLYPKGDDYVAKVEILMKDKD
SPLENLEHYTLDITKKDGKYYVKNMTNSIGG
>Mature_351_residues
MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFYSLLAILLILLLASFIKATRANNDSKEAVNKTNMIQK
KYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKELESREKELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQT
IIQYIVNYDVNITEKKEVKVKKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTPIPDSQLNQA
KMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEGTREVSQIREIRLYPKGDDYVAKVEILMKDKD
SPLENLEHYTLDITKKDGKYYVKNMTNSIGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41494; Mature: 41494

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFYSLLAILLILLLASFIK
CHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ATRANNDSKEAVNKTNMIQKKYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKELESRE
HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHCCCCCHHHHHHHH
KELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQTIIQYIVNYDVNITEKKEVKV
HHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTPIPDSQLNQA
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
KMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEGTREVSQIREIR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHEE
LYPKGDDYVAKVEILMKDKDSPLENLEHYTLDITKKDGKYYVKNMTNSIGG
CCCCCCCEEEEEEEEECCCCCHHHCCCEEEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKIISKYILTRFSKNGKHFDIPKEQRRVIPKFKNRRKMIVICFYSLLAILLILLLASFIK
CHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH
ATRANNDSKEAVNKTNMIQKKYEDNANTVQYSPKLKLYADKFIDTYMNISKDSKELESRE
HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHCCCCCHHHHHHHH
KELLKYFPSDYKKPDEKISDTERKLNSKEFYNIKRKDKQTIIQYIVNYDVNITEKKEVKV
HHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KKKKKSEKDKDEYETKTEEKQRKVNQNILINIPIKSENNKYVVVEYPYFTPIPDSQLNQA
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHH
KMVEDNLKDNKREDNPKAKAFIEDFFNKYASSKSDDMAYLMDNPEGLEGTREVSQIREIR
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHEE
LYPKGDDYVAKVEILMKDKDSPLENLEHYTLDITKKDGKYYVKNMTNSIGG
CCCCCCCEEEEEEEEECCCCCHHHCCCEEEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]