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The map label for this gene is ypaA [H]

Identifier: 161508667

GI number: 161508667

Start: 444637

End: 444996

Strand: Reverse

Name: ypaA [H]

Synonym: USA300HOU_0420

Alternate gene names: 161508667

Gene position: 444996-444637 (Counterclockwise)

Preceding gene: 161508668

Following gene: 161508666

Centisome position: 15.49

GC content: 32.78

Gene sequence:

>360_bases
GTGAATATCATCTCAACAATTTTAATCATATTTGTGGCATTAGAGTTTTTCTATATTATGTACCTTGAAACGATTGCTAC
AACTTCCAAAAAGACTAGCGAGACATTTAATATAAGCGTCGATAAATTGAAAGACAAAAATATTAACCTACTTTTGAAGA
ACCAAGGCGTATATAACGGTTTAATCGGAGTTTTGCTAATATACGGTTTGTTTATCAGCAGTAATCCAAAAGAAATATGC
GCAGCTATTTTAGTGTATATCATTGGCGTTGCTATTTATGGTGGCCTTTCAAGCAATATTAGTATCTTTTTCAAACAAGG
CACATTGCCAGTATTGGCACTCATATCAATGCTTTGGTAA

Upstream 100 bases:

>100_bases
AGACCAAGAATCCAATGATTTCCAACAATTAGTCAATGATCAACCACAGACACTGCAATCATTTTTACAAGAAAATATTT
AATAATAAAGGAGCGTTATA

Downstream 100 bases:

>100_bases
GTATTGGTGTTTGGGGGGGTGGAGATGTAGTCGGAGGTTTGGAGGATTTGAGCGAATTGTGTGTGGACTTTAGACTCAGA
GTATTTCATCCTAATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLKDKNINLLLKNQGVYNGLIGVLLIYGLFISSNPKEIC
AAILVYIIGVAIYGGLSSNISIFFKQGTLPVLALISMLW

Sequences:

>Translated_119_residues
MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLKDKNINLLLKNQGVYNGLIGVLLIYGLFISSNPKEIC
AAILVYIIGVAIYGGLSSNISIFFKQGTLPVLALISMLW
>Mature_119_residues
MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLKDKNINLLLKNQGVYNGLIGVLLIYGLFISSNPKEIC
AAILVYIIGVAIYGGLSSNISIFFKQGTLPVLALISMLW

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13188; Mature: 13188

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLKDKNINLLLKNQGVYNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCEEEEECCCHHHH
LIGVLLIYGLFISSNPKEICAAILVYIIGVAIYGGLSSNISIFFKQGTLPVLALISMLW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHC
>Mature Secondary Structure
MNIISTILIIFVALEFFYIMYLETIATTSKKTSETFNISVDKLKDKNINLLLKNQGVYNG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCEEEEECCCHHHH
LIGVLLIYGLFISSNPKEICAAILVYIIGVAIYGGLSSNISIFFKQGTLPVLALISMLW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]